Entry information : MePrx136 (cassava4.1_032477m)
Entry ID 9093
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-11-30 (Qiang Li)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-16 (Achraf Jemmat)
Peroxidase information: MePrx136 (cassava4.1_032477m)
Name (synonym) MePrx136 (cassava4.1_032477m)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx136
start..stop
S start..stop
PtPrx15 487 5e-175 1..324 1..326
EcamPrx61 461 4e-165 19..326 20..327
EgrPrx61 461 5e-165 19..326 20..327
EguPrx61 459 5e-164 19..326 20..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 300389..301375 987  
join(300389..301375)


exon

Literature and cross-references MePrx136 (cassava4.1_032477m)
DNA ref. Phytozome 12:   scaffold06011 (300389..301375)
Protein sequence: MePrx136 (cassava4.1_032477m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (307)
PWM (Da):   %s   36111.38 (33631.0)  
PI (pH):   %s   7.67 (7.67) Peptide Signal:   %s   cut: 22 range:22-328
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATPLSLFLF LLLTFIPFSQ SKLSLDYYAK TCPQFQEIIQ KVVTQKQKDS PITAAAVLRL FFHDCEVGGC DGSILISSTA FNKAERDAEP NLVLPGDAFD VILRAKTALE IQCPGIVSCS  DILATAARDL VSMVGGPQYN VPLGRKDGLE SNASRVEANL PTPNMPLSKV ISLYTSKGFT VQEMVALAGA RTIGFSPCKE FSNRLFNFSK TSDTDPALSP KYAEALKKLC ANYTQDASMT 
AFNDVITPNK FDNMYYQNLQ KGLGLLPVDQ AMAVDERTKP FVHLYASNDT AFLQDFGRAM EKLSVYKVKT GKEGEVRRRC DHFNTVNL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACTC CTCTTTCCCT CTTCCTCTTC CTCCTCCTCA CATTCATTCC ATTTTCCCAA TCCAAACTCT CCCTAGACTA TTATGCTAAA ACATGTCCAC AGTTCCAGGA GATAATACAA  AAAGTGGTCA CCCAGAAGCA AAAGGATTCT CCCATCACTG CCGCTGCTGT TCTTCGCCTT TTCTTCCACG ACTGCGAAGT GGGAGGCTGT GATGGTTCCA TCCTCATCTC CTCCACAGCC  TTCAACAAAG CCGAACGTGA CGCTGAGCCA AACCTTGTCC TCCCAGGGGA TGCATTTGAT GTTATCCTTC GTGCAAAAAC CGCCCTCGAA ATCCAATGCC CTGGCATTGT CTCCTGCTCT  GACATTCTTG CTACTGCCGC TCGCGACCTC GTCTCCATGG TGGGTGGCCC TCAGTACAAC GTGCCTCTAG GCAGAAAAGA CGGGCTTGAA TCCAACGCTT CTCGTGTTGA AGCCAATCTT  CCCACACCCA ACATGCCACT TTCCAAAGTC ATATCTCTTT ATACTTCCAA AGGGTTTACA GTGCAAGAAA TGGTAGCTTT AGCTGGTGCT CGAACAATAG GATTCTCCCC ATGTAAAGAG  TTTAGCAATA GGCTTTTCAA CTTCAGCAAA ACTTCTGATA CTGATCCTGC ACTTTCCCCT AAGTATGCAG AAGCGCTGAA GAAACTATGT GCTAATTACA CCCAAGACGC CTCCATGACT  GCTTTTAATG ACGTGATTAC CCCAAATAAG TTCGATAATA TGTATTACCA GAACTTGCAG AAAGGATTAG GGTTGCTTCC AGTGGATCAA GCCATGGCTG TGGATGAGAG GACCAAGCCC  TTCGTCCACT TGTATGCCTC CAATGATACC GCATTTTTGC AAGATTTTGG TCGTGCAATG GAGAAACTTA GCGTTTATAA AGTCAAGACG GGTAAGGAAG GAGAGGTGAG GCGGAGGTGT 
GACCATTTTA ATACTGTTAA CCTTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACTC CTCTTTCCCT CTTCCTCTTC CTCCTCCTCA CATTCATTCC ATTTTCCCAA TCCAAACTCT CCCTAGACTA TTATGCTAAA ACATGTCCAC AGTTCCAGGA GATAATACAA  AAAGTGGTCA CCCAGAAGCA AAAGGATTCT CCCATCACTG CCGCTGCTGT TCTTCGCCTT TTCTTCCACG ACTGCGAAGT GGGAGGCTGT GATGGTTCCA TCCTCATCTC CTCCACAGCC  TTCAACAAAG CCGAACGTGA CGCTGAGCCA AACCTTGTCC TCCCAGGGGA TGCATTTGAT GTTATCCTTC GTGCAAAAAC CGCCCTCGAA ATCCAATGCC CTGGCATTGT CTCCTGCTCT  GACATTCTTG CTACTGCCGC TCGCGACCTC GTCTCCATGG TGGGTGGCCC TCAGTACAAC GTGCCTCTAG GCAGAAAAGA CGGGCTTGAA TCCAACGCTT CTCGTGTTGA AGCCAATCTT  CCCACACCCA ACATGCCACT TTCCAAAGTC ATATCTCTTT ATACTTCCAA AGGGTTTACA GTGCAAGAAA TGGTAGCTTT AGCTGGTGCT CGAACAATAG GATTCTCCCC ATGTAAAGAG  TTTAGCAATA GGCTTTTCAA CTTCAGCAAA ACTTCTGATA CTGATCCTGC ACTTTCCCCT AAGTATGCAG AAGCGCTGAA GAAACTATGT GCTAATTACA CCCAAGACGC CTCCATGACT  GCTTTTAATG ACGTGATTAC CCCAAATAAG TTCGATAATA TGTATTACCA GAACTTGCAG AAAGGATTAG GGTTGCTTCC AGTGGATCAA GCCATGGCTG TGGATGAGAG GACCAAGCCC  TTCGTCCACT TGTATGCCTC CAATGATACC GCATTTTTGC AAGATTTTGG TCGTGCAATG GAGAAACTTA GCGTTTATAA AGTCAAGACG GGTAAGGAAG GAGAGGTGAG GCGGAGGTGT 
GACCATTTTA ATACTGTTAA CCTTTGA 

Retrieve as FASTA