Entry information : MePrx20 (cassava4.1_011653m)
Entry ID 9100
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-11-30 (Qiang Li)
Peroxidase information: MePrx20 (cassava4.1_011653m)
Name (synonym) MePrx20 (cassava4.1_011653m)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx20
start..stop
S start..stop
RcPrx52 567 0 11..329 1..317
PtPrx40 506 0 11..329 45..360
CclPrx113 492 2.94e-177 11..329 1..318
NtPrx85-1B 479 2.88e-172 11..329 1..320
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9100' 'join(93531..93773,93865..94059,94479..94644,94747..95129)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 93531..93773 241 N° 2 93865..94059 193 N° 3 94479..94644 164 N° 4 94747..95129 381
join(93531..93773,93865..94059,94479..94644,94747..95129)


exon

Literature and cross-references MePrx20 (cassava4.1_011653m)
DNA ref. Phytozome 12:   scaffold04265 (93531..95129)
Protein sequence: MePrx20 (cassava4.1_011653m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   34407.88 Transmb domain:   %s   i7-29o
PI (pH):   %s   6.76
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLSSFYYYNMAFSSQIYGLYLFMLxxxxxxxxAQLSSNYYATTCPKALSTIKIAVLKAVAKEHRLGASLLRMHFHDCFVNGCDASILLDDVSPSFKGEKTAGPNANSLRGFEVIDSIKS
QVESICPGVVSCADIIAVAARDSVAALGGPSWQVELGRRDSTTASYSAANTELPSPLMDLSDLISSFSNKGFTAKDMVALSGAHTTGQARCSMFRGRLYNETNIDSTLATSLKSSCPSTG
SDTNFSPLDATSPVIFDNAYFTNLVNNKGLLHSDQQLFSGGSTDSQVKTYSTNPITFYADFANAMVKMGKLSPLTGTEGEIRTDCRKVN

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACCTTTCTTCATTTTATTATTATAATATGGCATTTTCCTCACAAATATATGGATTGTATTTGTTCATGCTTTTNNNNNNNNNNNNNNNNNNNNATGCACAATTATCTTCCAATTAC
TATGCCACAACATGCCCAAAAGCTCTTTCTACCATCAAAATTGCTGTGCTTAAAGCTGTTGCAAAGGAGCATCGCCTGGGAGCATCTTTGCTTCGTATGCATTTCCATGACTGCTTTGTT
AAT
ATGTACTCTTTTCTCTCTCTCCCCCCACACACTAAATATCAATAATAATTATGGATGTTATTAATGAAGTTGTATGTGTATTGGCTGAAACAGGGATGTGATGCATCTATTTTATTA
GATGATGTCTCCCCAAGTTTCAAAGGTGAGAAGACTGCAGGCCCAAATGCAAATTCTCTTAGAGGCTTTGAAGTGATCGATTCAATTAAATCTCAAGTGGAGTCTATTTGCCCTGGAGTT
GTTTCTTGTGCTGATATTATAGCTGTTGCTGCTCGTGATTCAGTTGCTGCT
CTGTAAGTAATTCTAATGGAATTCTCTATATATTATTTATTCTTTTAAAATGGTGGATATAATTCCTTA
TATAATGGAACATTCTAACACCATGCTTCTGATAGGAGAATTATCAATTCGCAAAATATTAAAATGACTAGTGCTTCAATTTTACCAAGTATTTATCCAAGATATTCAAGTGCATTTTAA
ATTTCTTTAATCCAAATTAACCTAAAAGTTCAAATTATACTCAAACAAGGATCGACTCCTATCTCCACCTATTGACAAAAGGACTACGATATTGACTGAAATGGTAGAGGCTGTATATAT
CCAACGAATTTGACAATTTGAAAAGCATGAATTCTAAAGTAATTTCCATCGAGAAAAAGAAAATATATTTCAACTCAATTGGGTTAACAAAAAAGTAAGAATTTTTATCCAGTTGGGTGG
TCCTTCATGGCAAGTTGAATTGGGTAGAAGAGATTCCACCACTGCAAGTTATAGTGCTGCAAATACTGAGCTTCCATCCCCACTAATGGACCTCAGCGACCTTATATCTTCCTTCTCAAA
TAAAGGCTTCACTGCCAAAGATATGGTCGCTCTTTCAG
AGGCAAGATAACCATATAAAACGCTTGTCAAATGTCAACTGTTGTATTATCACTTCAGATTTTGGTTTCTGCAAACTAATTT
CTATTGTTTTCATGATTAATAGGAGCTCACACAACAGGCCAAGCCAGGTGCTCGATGTTTCGAGGCCGACTCTACAATGAGACAAACATAGATTCAACACTGGCAACATCATTAAAATCA
AGCTGTCCAAGTACAGGCAGCGACACGAATTTCTCTCCACTAGATGCTACTAGCCCTGTAATATTTGATAATGCCTATTTCACCAATTTGGTTAACAACAAAGGCCTTCTGCACTCAGAT
CAGCAGCTTTTTAGTGGTGGCTCCACCGATTCGCAGGTAAAAACCTACAGCACCAATCCTATTACTTTCTATGCAGATTTTGCCAACGCAATGGTCAAGATGGGGAAACTCAGTCCACTC
ACAGGAACCGAGGGAGAGATTCGCACTGACTGCCGGAAAGTTAAC

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCACCTTTCTTCATTTTATTATTATAATATGGCATTTTCCTCACAAATATATGGATTGTATTTGTTCATGCTTTTNNNNNNNNNNNNNNNNNNNNATGCACAATTATCTTCCAATTAC
TATGCCACAACATGCCCAAAAGCTCTTTCTACCATCAAAATTGCTGTGCTTAAAGCTGTTGCAAAGGAGCATCGCCTGGGAGCATCTTTGCTTCGTATGCATTTCCATGACTGCTTTGTT
AAT
GGATGTGATGCATCTATTTTATTAGATGATGTCTCCCCAAGTTTCAAAGGTGAGAAGACTGCAGGCCCAAATGCAAATTCTCTTAGAGGCTTTGAAGTGATCGATTCAATTAAATCT
CAAGTGGAGTCTATTTGCCCTGGAGTTGTTTCTTGTGCTGATATTATAGCTGTTGCTGCTCGTGATTCAGTTGCTGCT
TTGGGTGGTCCTTCATGGCAAGTTGAATTGGGTAGAAGAGAT
TCCACCACTGCAAGTTATAGTGCTGCAAATACTGAGCTTCCATCCCCACTAATGGACCTCAGCGACCTTATATCTTCCTTCTCAAATAAAGGCTTCACTGCCAAAGATATGGTCGCTCTT
TCAG
GAGCTCACACAACAGGCCAAGCCAGGTGCTCGATGTTTCGAGGCCGACTCTACAATGAGACAAACATAGATTCAACACTGGCAACATCATTAAAATCAAGCTGTCCAAGTACAGGC
AGCGACACGAATTTCTCTCCACTAGATGCTACTAGCCCTGTAATATTTGATAATGCCTATTTCACCAATTTGGTTAACAACAAAGGCCTTCTGCACTCAGATCAGCAGCTTTTTAGTGGT
GGCTCCACCGATTCGCAGGTAAAAACCTACAGCACCAATCCTATTACTTTCTATGCAGATTTTGCCAACGCAATGGTCAAGATGGGGAAACTCAGTCCACTCACAGGAACCGAGGGAGAG
ATTCGCACTGACTGCCGGAAAGTTAAC

Retrieve as FASTA