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Entry information : MePrx29 (cassava4.1_011804m)
Entry ID 9108
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-01 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: MePrx29 (cassava4.1_011804m)
Name (synonym) MePrx29 (cassava4.1_011804m)
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx29
start..stop		 S start..stop
RcPrx85 496 4.42e-179 1..325 1..320
MePrx116 468 7.65e-168 1..325 1..326
RcPrx77 457 1.08e-163 11..325 10..323
MePrx109 454 1.9e-162 1..325 1..321
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9108' 'complement(join(166380..166774,166855..167020,167112..167303,167387..167608))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 167387..167608 220 N° 2 167112..167303 190 N° 3 166855..167020 164 N° 4 166380..166774 393
complement(join(166380..166774,166855..167020,167112..167303,167387..167608))


exon

Literature and cross-references MePrx29 (cassava4.1_011804m)
DNA ref. Phytozome 12:   scaffold07035 (167608..166380)
Protein sequence: MePrx29 (cassava4.1_011804m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (298)
PWM (Da):   %s   34674.31 (31800.9) Transmb domain:   %s   i5-27o
PI (pH):   %s   7.6 (7.69) Peptide Signal:   %s   cut: 28 range:28-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSLSLITFMALTILVMTFSCIPCQAQLSSTFYDRTCPSALSII
KGAVSAAVSRERRMAASLLRLHFHDCFVQGCDGSVLLDDTPSMTGEKNSLNNANSIRGFNVIENVKSQVESRCPGIVSCADIVAVAARDASVAAGGPSWTVKLGRRDSLTASGDLADQNLPRFTNTLSELTSSFSRKNLNQRDLVALSG
AHTIGQSRCFSFRARVNSNASDIDPEFARSLREDLPCPADGSGNSNLAPLDLVTPNAFDNSFFRNLVNKKGLLQSDQVLFSGGATDSIVNQYVRDSSIFRSDFAAAMVKMGDLSPLTGSQ
GEIRKVCNVV

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTAGCTTATCTTTAATTACTTTCATGGCTCTCACAATATTAGTGATGACCTTCTCATGCATCCCATGTCAAGCACAGCTTTCTTCAACCTTCTATGACAGGACATGTCCTTCT
GCTTTAAGCATTATAAAGGGTGCTGTTAGTGCAGCTGTGTCCCGTGAGCGGAGAATGGCTGCTTCCCTCCTTCGCCTTCATTTCCATGATTGCTTTGTTCAAGTAAAAATCACTTGTTGT
GTTTTGTAATTATCACATGCCAAGTTCTTGAGATCCCAAGTTCCTAATTTTGTGTATTAATGCAGGGGGTTGCGATGGCTCGGTGTTGCTGGACGATACTCCCTCAATGACTGGCGAGAA
AAATTCACTCAATAATGCCAATTCTATCAGAGGATTTAATGTCATTGAAAATGTCAAGTCTCAAGTGGAGAGTCGATGTCCTGGAATTGTTTCATGTGCTGACATCGTTGCAGTGGCTGC
TCGCGATGCATCTGTTGCTGTAAGAATTAACTTTCATCTCTTTATCAATCGAGCTTTGAGAAATATATACATCCATTTATTATATCAATGGCCTGTATCGATAACCGCAGGCGCCGGAGG
ACCATCATGGACAGTGAAGCTTGGAAGAAGAGACTCCCTCACTGCAAGCGGAGACCTTGCTGATCAAAACCTTCCTCGCTTTACAAATACTCTCAGTGAACTCACTTCCTCGTTCAGTAG
GAAGAATCTGAATCAAAGAGATTTGGTTGCCCTTTCAGGTTGGTTACACAAGAAATAAAATTATTTTCAGTTGTATGTAACTATATTTAGATGGCTAACGGTTTCATTTGTGAATCAGGA

GAGCACATACAATTGGCCAATCAAGATGTTTCAGCTTCCGTGCTAGAGTTAACAGCAATGCAAGTGATATTGATCCTGAGTTTGCTAGGTCTCTGAGGGAAGATCTTCCGTGCCCTGCTG
ATGGTTCTGGAAATTCAAACCTTGCACCACTTGATTTAGTGACTCCCAATGCTTTTGATAACAGCTTCTTCAGGAATCTTGTTAACAAGAAGGGACTTCTTCAATCAGATCAGGTTCTTT
TCAGTGGTGGTGCTACGGACAGCATTGTCAATCAGTACGTCAGGGACTCTTCAATCTTCAGGTCTGATTTTGCAGCTGCCATGGTAAAGATGGGAGATTTAAGCCCCTTGACTGGTTCTC
AAGGAGAGATAAGAAAAGTTTGCAATGTTGTCAAC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTAGCTTATCTTTAATTACTTTCATGGCTCTCACAATATTAGTGATGACCTTCTCATGCATCCCATGTCAAGCACAGCTTTCTTCAACCTTCTATGACAGGACATGTCCTTCT
GCTTTAAGCATTATAAAGGGTGCTGTTAGTGCAGCTGTGTCCCGTGAGCGGAGAATGGCTGCTTCCCTCCTTCGCCTTCATTTCCATGATTGCTTTGTTCAAGGTTGCGATGGCTCGGTG
TTGCTGGACGATACTCCCTCAATGACTGGCGAGAAAAATTCACTCAATAATGCCAATTCTATCAGAGGATTTAATGTCATTGAAAATGTCAAGTCTCAAGTGGAGAGTCGATGTCCTGGA
ATTGTTTCATGTGCTGACATCGTTGCAGTGGCTGCTCGCGATGCATCTGTTGCTGCCGGAGGACCATCATGGACAGTGAAGCTTGGAAGAAGAGACTCCCTCACTGCAAGCGGAGACCTT
GCTGATCAAAACCTTCCTCGCTTTACAAATACTCTCAGTGAACTCACTTCCTCGTTCAGTAGGAAGAATCTGAATCAAAGAGATTTGGTTGCCCTTTCAGGAGCACATACAATTGGCCAA
TCAAGATGTTTCAGCTTCCGTGCTAGAGTTAACAGCAATGCAAGTGATATTGATCCTGAGTTTGCTAGGTCTCTGAGGGAAGATCTTCCGTGCCCTGCTGATGGTTCTGGAAATTCAAAC
CTTGCACCACTTGATTTAGTGACTCCCAATGCTTTTGATAACAGCTTCTTCAGGAATCTTGTTAACAAGAAGGGACTTCTTCAATCAGATCAGGTTCTTTTCAGTGGTGGTGCTACGGAC
AGCATTGTCAATCAGTACGTCAGGGACTCTTCAATCTTCAGGTCTGATTTTGCAGCTGCCATGGTAAAGATGGGAGATTTAAGCCCCTTGACTGGTTCTCAAGGAGAGATAAGAAAAGTT
TGCAATGTTGTCAAC

Retrieve as FASTA