Entry information : MePrx95 (cassava4.1_027345m)
Entry ID 9148
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-11-30 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-01 (Qiang Li)
Peroxidase information: MePrx95 (cassava4.1_027345m)
Name (synonym) MePrx95 (cassava4.1_027345m)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx95
start..stop
S start..stop
RcPrx66 502 0 24..333 18..327
CsaPrx30 469 4e-168 12..333 13..332
VvPrx25 462 4e-165 20..333 14..327
PpePrx35 460 2e-164 10..332 3..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1123798..1124799 1002  
join(1123798..1124799)


exon

Literature and cross-references MePrx95 (cassava4.1_027345m)
DNA ref. Phytozome 12:   scaffold12794 (1123798..1124799)
Protein sequence: MePrx95 (cassava4.1_027345m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (309)
PWM (Da):   %s   36817.72 (34140.2)  
PI (pH):   %s   5.2 (5.20) Peptide Signal:   %s   cut: 25 range:25-333
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASFPFPFLL PVLLLLFFPS ISLSQSNLSV DYYKTTCPDF PNIIRETVTN KQLTSPTTAA ATLRLFFHDC IVDGCDASVL ISSNAFNKAE RDAEINHSLA GDAFDVVLRA KTALETKCPK  IVSCADILAQ ATRDLVIIVG GPFYPVQLGR KDGLISMVSH ADEGLPRTNM TMDQLIDLFD KKGFSIKEFV ALLGSHTIGF SHCKEFADRL YNFSKTTPTD PLFNPKYAEA LKTLCANYTI 
DSTISAFNDV LTPGKFDNMY YQNLPKGLGL LITDNLLMKD PRTKPIAELY AKDQTVFFTD FSDAMEKLSV LEVKSGTEGE VRNRCDQFNS IKT 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTT TCCCTTTTCC TTTTCTTCTT CCCGTTCTTC TCCTCCTCTT CTTTCCCTCC ATTTCCCTCT CTCAGTCCAA CCTATCCGTC GACTACTACA AGACCACCTG TCCTGATTTC  CCAAACATCA TTCGCGAAAC CGTCACCAAC AAGCAACTCA CCAGCCCCAC CACTGCCGCT GCCACTTTAC GTCTCTTCTT TCATGACTGC ATAGTCGATG GCTGTGACGC CTCCGTTCTC  ATTTCCTCTA ATGCTTTTAA TAAGGCTGAG CGAGATGCTG AGATCAACCA TAGCCTTGCT GGGGATGCCT TCGACGTTGT GCTCAGAGCC AAGACTGCTC TAGAGACCAA ATGCCCTAAA  ATAGTCTCTT GCGCTGATAT TCTAGCTCAA GCCACCCGTG ACCTCGTCAT CATTGTCGGG GGACCGTTCT ATCCCGTTCA ACTAGGAAGG AAGGACGGGC TAATCTCCAT GGTCTCTCAT  GCAGACGAAG GTCTTCCGAG AACAAACATG ACAATGGATC AATTGATCGA TTTGTTTGAT AAGAAAGGAT TCAGCATCAA GGAATTTGTT GCATTGCTGG GTAGTCACAC CATCGGATTC  TCTCACTGTA AGGAGTTTGC CGACAGGCTT TATAATTTCA GCAAGACCAC CCCAACAGAC CCCCTTTTCA ATCCCAAGTA TGCCGAAGCA TTGAAGACAC TATGCGCTAA TTACACAATA  GATTCAACCA TTTCTGCCTT CAACGATGTG CTTACGCCCG GCAAGTTCGA TAACATGTAT TACCAGAACT TGCCTAAAGG CCTGGGGCTG TTGATAACTG ATAATCTCCT GATGAAGGAC  CCAAGGACTA AGCCCATTGC TGAGCTTTAC GCAAAGGACC AGACAGTGTT CTTTACGGAT TTTTCTGATG CAATGGAGAA GCTTAGCGTT CTTGAGGTCA AGAGTGGGAC TGAAGGAGAG 
GTCAGGAACA GGTGCGATCA GTTCAATTCA ATTAAGACTT AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTT TCCCTTTTCC TTTTCTTCTT CCCGTTCTTC TCCTCCTCTT CTTTCCCTCC ATTTCCCTCT CTCAGTCCAA CCTATCCGTC GACTACTACA AGACCACCTG TCCTGATTTC  CCAAACATCA TTCGCGAAAC CGTCACCAAC AAGCAACTCA CCAGCCCCAC CACTGCCGCT GCCACTTTAC GTCTCTTCTT TCATGACTGC ATAGTCGATG GCTGTGACGC CTCCGTTCTC  ATTTCCTCTA ATGCTTTTAA TAAGGCTGAG CGAGATGCTG AGATCAACCA TAGCCTTGCT GGGGATGCCT TCGACGTTGT GCTCAGAGCC AAGACTGCTC TAGAGACCAA ATGCCCTAAA  ATAGTCTCTT GCGCTGATAT TCTAGCTCAA GCCACCCGTG ACCTCGTCAT CATTGTCGGG GGACCGTTCT ATCCCGTTCA ACTAGGAAGG AAGGACGGGC TAATCTCCAT GGTCTCTCAT  GCAGACGAAG GTCTTCCGAG AACAAACATG ACAATGGATC AATTGATCGA TTTGTTTGAT AAGAAAGGAT TCAGCATCAA GGAATTTGTT GCATTGCTGG GTAGTCACAC CATCGGATTC  TCTCACTGTA AGGAGTTTGC CGACAGGCTT TATAATTTCA GCAAGACCAC CCCAACAGAC CCCCTTTTCA ATCCCAAGTA TGCCGAAGCA TTGAAGACAC TATGCGCTAA TTACACAATA  GATTCAACCA TTTCTGCCTT CAACGATGTG CTTACGCCCG GCAAGTTCGA TAACATGTAT TACCAGAACT TGCCTAAAGG CCTGGGGCTG TTGATAACTG ATAATCTCCT GATGAAGGAC  CCAAGGACTA AGCCCATTGC TGAGCTTTAC GCAAAGGACC AGACAGTGTT CTTTACGGAT TTTTCTGATG CAATGGAGAA GCTTAGCGTT CTTGAGGTCA AGAGTGGGAC TGAAGGAGAG 
GTCAGGAACA GGTGCGATCA GTTCAATTCA ATTAAGACTT AG 

Retrieve as FASTA