Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
281 |
| PWM (Da): |
29867.41 |
|
| PI (pH):
| 4.82 |
|
Sequence 352
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
VEEVCPGVVSCADIVVLAAREGVVQLPSPLADLSETLASFSSRGFDERETVTLLGAHSIGTIHCKFFESRLYNFGGTNKPDPSMDPQFLNQMRSRCNNSDAPGSPAASPSSDAPEPSSLVPPASFDSPESSSTASSPSYDGSPSPSSEKPGRMGAMSSVAAPSIFPQRSLSFSPSSSRKSTVSYEGSLQSSMEDPGVPMTYEGPGIDFGSVYYHRLLQGRGILYADQQLMSGEETRIWVKAYASDVTLFRRDFAQAMIKLSDLHVLTGSAGQVRFNCSRV |
Retrieve as FASTA
|
|
| Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (Gap and extra in frame; 5' is missing due to NNNN in DNA). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTTGAAGAAGTATGCCCTGGTGTTGTTTCTTGTGCTGATATTGTTGTTTTAGCAGCTAGAGAAGGTGTTGTTCAGGTATATATCTCAGTCCTCCCTCCACCTCCTCTCTCTGTCTCTGTC
TCACTTTCAGCGTCTCGTTGAATTTGGGAATTTCAGGCAGGTGGTCCATTCTATCCACTACTAACTGGCAGAAGAGACAGTTTCCGCACTTTCCCAGATATAGCAACTTATGAGCTTCCT
TCACCCCTAGCTGATCTATCTGAAACCCTGGCATCATTTTCATCTAGGGGTTTTGATGAAAGAGAAACAGTCACTCTCTTAGGTATTATTCTGACGTTCCTTACCTTATTGGTGACATGC
AATCTCTTGATTGAGCTTTGTGCAACTGATCATTATTGTTTGTGATTGTCTCCGCAATGATCTGAGGTTTTATTAATTTAACACCTATTAAATTCCTGTGATTAAAAAAAAACTTCCTTT
TTTCCCCTTCTTTTATCATCATTATCCATAAAAAGGTTTGGTAATGCATTGGGCGTTTAAACTTCTTATTTCTGTTTTTGTTTTTACGATTTGATCCTTAGTTGACAGTGAATTTTTCTT
GCTTTAATAGAAATGGATGCTTATAGATTAATCTATTGTTTGGAAATTGATTCCTCTGACGTGAATTGTGATAGTTAATCTGTTAAAACTGGTTAGAATTTTGTTCTGTAGAAGGGCTAC
ACGTTACTATCTTCTGTTTATGTCCCTGAAGCCACAGACTTTTTGTGCTTGATTAGGCTCATTTCCAAAACATTGTTACCTGTCATGTTCTTGCTTTAGAACTATTCGTTTTGCAGCAAC
CTAGGATCTAAGATTTCTAATTGTTTCTTCGTAACGCTTCTAGGTGCTCATAGCATTGGAACAATCCACTGCAAATTCTTTGAAAGCCGTCTCTACAACTTCGGTGGGACCAATAAGCCA
GATCCCTCTATGGATCCTCAATTTCTTAACCAGATGAGATCAAGATGCAACAATAGCGATGCACCAGGGTCTCCAGCTGCATCACCTTCCTCTGATGCCCCCGAGCCATCTTCATTGGTA
CCACCAGCTTCCTTTGACAGCCCAGAGTCATCATCAACAGCATCATCCCCTTCCTATGATGGATCACCATCTCCATCTTCTGAAAAACCAGGAAGGATGGGTGCAATGTCATCAGTAGCA
GCACCATCAATTTTTCCCCAACGCTCATTGTCCTTCTCACCATCATCATCTAGGAAATCAACAGTTTCATATGAAGGTTCACTGCAGTCCTCAATGGAGGATCCAGGAGTCCCTATGACC
TATGAGGGACCTGGAATAGATTTTGGCTCAGTGTACTACCACAGACTTCTGCAAGGCAGAGGAATCCTCTATGCTGATCAGCAACTAATGTCTGGGGAAGAAACTAGGATCTGGGTTAAA
GCATATGCTTCAGATGTCACCTTGTTCCGCCGAGACTTTGCCCAGGCAATGATAAAGCTCTCAGATCTCCATGTCCTCACAGGTTCAGCAGGTCAGGTCCGGTTCAATTGTTCAAGGGTG
GCA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTTGAAGAAGTATGCCCTGGTGTTGTTTCTTGTGCTGATATTGTTGTTTTAGCAGCTAGAGAAGGTGTTGTTCAGCTTCCTTCACCCCTAGCTGATCTATCTGAAACCCTGGCATCATTT
TCATCTAGGGGTTTTGATGAAAGAGAAACAGTCACTCTCTTAGGTGCTCATAGCATTGGAACAATCCACTGCAAATTCTTTGAAAGCCGTCTCTACAACTTCGGTGGGACCAATAAGCCA
GATCCCTCTATGGATCCTCAATTTCTTAACCAGATGAGATCAAGATGCAACAATAGCGATGCACCAGGGTCTCCAGCTGCATCACCTTCCTCTGATGCCCCCGAGCCATCTTCATTGGTA
CCACCAGCTTCCTTTGACAGCCCAGAGTCATCATCAACAGCATCATCCCCTTCCTATGATGGATCACCATCTCCATCTTCTGAAAAACCAGGAAGGATGGGTGCAATGTCATCAGTAGCA
GCACCATCAATTTTTCCCCAACGCTCATTGTCCTTCTCACCATCATCATCTAGGAAATCAACAGTTTCATATGAAGGTTCACTGCAGTCCTCAATGGAGGATCCAGGAGTCCCTATGACC
TATGAGGGACCTGGAATAGATTTTGGCTCAGTGTACTACCACAGACTTCTGCAAGGCAGAGGAATCCTCTATGCTGATCAGCAACTAATGTCTGGGGAAGAAACTAGGATCTGGGTTAAA
GCATATGCTTCAGATGTCACCTTGTTCCGCCGAGACTTTGCCCAGGCAATGATAAAGCTCTCAGATCTCCATGTCCTCACAGGTTCAGCAGGTCAGGTCCGGTTCAATTGTTCAAGGGTG
GCA |
Retrieve as FASTA
|
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