Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
110 |
PWM (Da): |
12169.06 |
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PI (pH):
| 5.55 |
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Sequence 158
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
NFDDCDASVLLKSTLGNPSQRDQPTIRAFKAIDEAKSQIAALCPSTVSCIHTLAFVAHGSSSKMRGTSYNELILLISYYFLFSELLYSFNEIHAQDQSMNSEYVVFIKIE |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (5', 3' and PS in frame are missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AATTTTGACGATTGTGACGCTTCAGTGCTGCTAAAATCCACACTAGGAAACCCGTCACAGAGAGACCAACCAACAATCCGAGCTTTCAAGGCGATCGATGAAGCCAAATCTCAAATTGCA GCATTATGTCCAAGTACTGTGTCTTGTATACACACTCTAGCTTTTGTTGCTCATGGTAGCTCCTCCAAAATGCGAGGAACTAGTTATAACGTACCTTTATGATAATTATAGAATTAGGGA GGGACAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNAAAATTAAAAAAAATCGAATCGATTAGTGATAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGGTGTAAAAAATAAAAAGCTCAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTCTATCTAAAATCAATTCGATTCAATTTTCACAAATAC TAAAATTTCAGTTTTTGATTTATTTGATTGAATTTAGTTTTGAATTAAATGCTCATAAAATTTGTATTCTCCATTGTTCAACATAAAGCAGTTTGCTCAAATTTTTAGAAAAAAAGGATA TACATTGATGAGATGATTTTGTATTCTCCATTCTTCAACATAAAGCAGTTTGCTCAAATTTTTAGAAAAAAACGAATATACATTGATGAGATGATAGCAATCTCAGGAGCTCATTCTATT GATCTCATATTACTTTTTATTTTCTGAGCTATTATATTCTTTCAATGAGATTCATGCACAAGATCAATCAATGAACTCTGAATATGTAGTCTTTATAAAGATCGAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AATTTTGACGATTGTGACGCTTCAGTGCTGCTAAAATCCACACTAGGAAACCCGTCACAGAGAGACCAACCAACAATCCGAGCTTTCAAGGCGATCGATGAAGCCAAATCTCAAATTGCA GCATTATGTCCAAGTACTGTGTCTTGTATACACACTCTAGCTTTTGTTGCTCATGGTAGCTCCTCCAAAATGCGAGGAACTAGTTATAACGAGCTCATTCTATTGATCTCATATTACTTT TTATTTTCTGAGCTATTATATTCTTTCAATGAGATTCATGCACAAGATCAATCAATGAACTCTGAATATGTAGTCTTTATAAAGATCGAA |
Retrieve as FASTA
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