Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
240 |
PWM (Da): |
26070.18 |
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PI (pH):
| 6.68 |
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Sequence 282
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
QGCDSSVLLDGSAGGPSEKSERPNLTLRKQALKSSTSFERLSTNSVAVSSLALT*SPSLPVLQTGLDYDVLLGRRDGVNFARVNQTFVDLVGPDANTTTILVKLARKKLDATDAVALSGSHTIGIGHTTSFTDRLYPTQDPTMDKTFAKSLKRTCPKPDTRNTTFLDIRSPNKFDNKYYxVDLMNRQGLFTSDHDSFHDQDGELNVLTGKQGEIRANCSARNSDNKLLVYVAEEEMDHLLK |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (5' is missing; stop in frame).
complement(join(531473..531613,531644..532040,532116..532298)) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGATGCGATAGCTCGGTGTTGCTTGATGGATCCGCCGGAGGACCAAGTGAAAAATCTGAACGGCCTAACTTAACCTTAAGAAAACAAGCTTTAAAATCGTCAACAAGCTTCGAGAGATT GTCCACAAACAGTGTGGCCGTGTCGTCTCTTGCTCTGACATAGTCGCCATCGCTGCCCGTGATTCCGTTTTCTTGGTAATCACCAACTACTGTAACTTTTTCACTTCTTTAAAGATAACT CAGTTTCTTTTATGGGTTGCAGACCGGTCTTGACTACGACGTCCTATTGGGAAGACGAGATGGAGTAAACTTCGCTCGAGTGAATCAAACTTTTGTAGACCTAGTAGGACCAGACGCTAA CACTACCACCATTCTCGTCAAGCTTGCTCGGAAAAAGCTTGATGCCACCGATGCAGTGGCCCTATCAGGTTCCCACACCATCGGCATAGGCCACACCACATCCTTCACCGACCGTCTTTA TCCAACCCAAGATCCTACCATGGACAAAACCTTCGCCAAAAGTCTCAAGCGAACTTGTCCGAAACCAGACACCAGGAACACAACTTTCTTGGATATTCGATCCCCTAATAAATTTGACAA CAAGTACTACTNNGTTGATCTCATGAACCGCCAAGGGCTGTTTACCTCGGACCATTGTTACTAGCTTCGCCATTAATGAAACACTGATAGTTTCCATGATCAAGATGGGGAACTGAACGT TTTGACAGGGAAACAAGGGGAAATTCGAGCCAATTGTTCTGCCAGGAACTCTGATAACAAGCTTTTGGTGTATGTAGCAGAAGAGGAGATGGATCACCTGCTGAAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGATGCGATAGCTCGGTGTTGCTTGATGGATCCGCCGGAGGACCAAGTGAAAAATCTGAACGGCCTAACTTAACCTTAAGAAAACAAGCTTTAAAATCGTCAACAAGCTTCGAGAGATT GTCCACAAACAGTGTGGCCGTGTCGTCTCTTGCTCTGACATAGTCGCCATCGCTGCCCGTGATGCAGACCGGTCTTGACTACGACGTCCTATTGGGAAGACGAGATGGAGTAAACTTCGC TCGAGTGAATCAAACTTTTGTAGACCTAGTAGGACCAGACGCTAACACTACCACCATTCTCGTCAAGCTTGCTCGGAAAAAGCTTGATGCCACCGATGCAGTGGCCCTATCAGGTTCCCA CACCATCGGCATAGGCCACACCACATCCTTCACCGACCGTCTTTATCCAACCCAAGATCCTACCATGGACAAAACCTTCGCCAAAAGTCTCAAGCGAACTTGTCCGAAACCAGACACCAG GAACACAACTTTCTTGGATATTCGATCCCCTAATAAATTTGACAACAAGTACTACTNNGTTGATCTCATGAACCGCCAAGGGCTGTTTACCTCGGACCATGATAGTTTCCATGATCAAGA TGGGGAACTGAACGTTTTGACAGGGAAACAAGGGGAAATTCGAGCCAATTGTTCTGCCAGGAACTCTGATAACAAGCTTTTGGTGTATGTAGCAGAAGAGGAGATGGATCACCTGCTGAA A |
Retrieve as FASTA
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