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Entry information : CclAPx04 (clementine0.9_019617m)
Entry ID 9160
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CclAPx04 (clementine0.9_019617m)
Name (synonym) CclAPx04 (clementine0.9_019617m)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclAPx04
start..stop		 S start..stop
CsAPx01 516 0 1..250 1..250
CppAPx01 516 0 1..250 1..250
PtriAPx01 508 0 1..250 1..250
InAPx01 462 6.08e-168 1..250 1..250
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9160' 'join(2512919..2513037,2513114..2513288,2513399..2513464,2514278..2514326,2514411..2514496,2514620..2514699,2514843..2514945,2515067..2515125,2515245..2515260)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2512919..2513037 117 N° 2 2513114..2513288 173 N° 3 2513399..2513464 64 N° 4 2514278..2514326 47
N° 5 2514411..2514496 84 N° 6 2514620..2514699 78 N° 7 2514843..2514945 101 N° 8 2515067..2515125 57
N° 9 2515245..2515260 14  
join(2512919..2513037,2513114..2513288,2513399..2513464,2514278..2514326,2514411 ..2514496,2514620..2514699,2514843..2514945,2515067..2515125,2515245..2515260)


exon

Literature and cross-references CclAPx04 (clementine0.9_019617m)
DNA ref. Phytozome 12:   scaffold_8 (2512919..2515260)
Protein sequence: CclAPx04 (clementine0.9_019617m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27481.86  
PI (pH):   %s   5.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYLAGVVGVEVTGGPDIPFHPGRDD
KAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYADEDAFFADYAEAHLKLS
ELGFAEA

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCG
CGTACGTGTACTCTCTCGTTATACGTATGTATTGAATATGTGTGGGTGTGAGATTGATTTTTTTTTTAATTGTTCAGGTGGCACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGA
GGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCT
GACCTTTATCAGAGGTACTGTATAAATCAATTTGTTAATATCAGACGGCGATCTTTGACTTTTCTGATGACCGATTTAAATTTGTTTAACCGATCTTTTTTGTTTATCATCGTGGATCAT
GTAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCCGGGAAGAGATATGTAAGTTATTATTATTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTGTTGTTTCGAGGATGAAATCGATTTGTGAAATTGATCTTAGTAGCTTGTTTAATTGTTTTGCTTGATTTATGTAAATTAATGTTGAAACATTTATAGCTCATTTACTGATAAAA
TTGGCCTTATTTACTGNNNNNNNNNNNNNNNNNNNNNGTGAGTGTTACTCTGTTTTCTGGTCTTTGGCTTTCATTGTTCTGTGTAAAACTTTATTTGGTCGTTGGGTGAAAATTGAAATT
AAAGGAAGCAGTATAGGAATGTGCATGCGATACTTTTCTAGTTTTTTTTAGCGACTGCACTTGGCTTGGAAGATGTTGATGAATTTGTGGAAATTTTTAGAAATAAGAAAGTTGTTTCAT
AACATAAAACTTGTGGCTTTTGAAATTGTGTTGCGCAATCAAATTGCTACGATTGTCTATGCGGACTACCACAAGTTTTGTGTGACTCTGTGGATGGCCCTCCGTGGTTAAGTGGCTGGG
TAATGGATACTGAAGTTATTGCACTGTTGCTTTTTTCACTGTACTTTGGTTATCAAATAAAATATCAGCCACCCTTTTGATGTGACATTACACACGTCCAAGTTTACAACACTGTTTATT
ATAACATTGTATATTGAAATTATAACACTTAGCTAGTTTTTTTCCCCTTTTAGTTGTGATTTGCTCTATTTATCTATAAAATACTTATCTGTATGGTGTTTTTGATTACAAATCTTGTAT
TGTTGTGATTTTTTGCTACTGACAATGGCCGTCTCCTATTCTCAGGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGGGTTTGTATTTTTTTTAAGGATCTT
ATTAAATGAGCTGTTTTGTTGCTTCATCTTGGATGGCTTCTTTACATTTAATTGCTGCAGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTG
TTGCTCTCTCTGGTGGCCACACCCTGTGGTTAGTGCTAAACTGTGAAGATTTGTTGCTTTCCTCGTGTGCTGAAATAATGTGGTTGTGAAGTGTTAAATTGGCTGCATTGTTTATAGTCT
AATCAGCTTATTGGTTTGAATAACTTTGTAGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACACGTATGTG
TCACTGGTCTCTTTGCCTGACATGTTCGGTTGTGTATTGTTTGAGTCTTTTTGCATGAATAGTAGTCTTACTTTAAAATGTTAAATGAGTCCGTAGTTTAGGGAGAAATTTGACCTTGAG
TGTGCATGAAAAATAGGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGCGC
GGTGCGTATGCTTAATTTTTATACTTCCTCAATGGTATATTGTTATTCACTTTATGTTCTGTTGGTATTTTCAAATGAATGTACTCTGATGATTATTTTGGTTGCTTCTTATCACCTTTC
AGGATGAGGACGCTTTCTTCGCTGATTATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGGGGTAAGATTCTTTTCACCTTTGCTGATTATGCTTATTTCAATTTTATTGTTTTTCCCT
CTCTTAAAAATCTTCCTAATGTTACAACTCAACTTATTGGGTGCGCCTGTTCTTTGTTGCAGATTTGCTGAAGCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCG
TGGCACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTT
TTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCCGGGAAGAGAT
GACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCTCTCT
GGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGAT
GGTCTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATTATGCTGAGGCTCATCTC
AAGCTCTCTGAGCTAGGATTTGCTGAAGCCTAA

Retrieve as FASTA