Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
134 |
PWM (Da): |
14746.27 |
|
PI (pH):
| 9.39 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CHTLGFSHCT QITNRLYNFS PGTPVDPTLN RQYATQLQGM CPRNVDPRVA IDMDPTSPRI FDNAYFQNLV QGKGLFTSDQ VLFTDSRSRN TVTTWASNSQ AFNAAFIQAI TKLGRVGVKT
GGNGNIRFDC GRFN
|
Retrieve as FASTA
|
|
Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing due to 'NNNN' in DNA). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTCACACTC TAGGATTCTC ACACTGCACC CAAATCACGA ACCGGCTCTA CAATTTCAGC CCAGGAACCC CGGTCGACCC GACCCTAAAC CGGCAATATG CGACCCAACT ACAGGGTATG
TGCCCGCGGA ATGTGGATCC GAGAGTAGCC ATTGACATGG ATCCGACAAG TCCTAGGATA TTCGACAATG CGTATTTCCA GAATCTTGTA CAAGGAAAGG GTTTGTTCAC TTCGGATCAA
GTTCTTTTCA CGGATTCAAG ATCAAGAAAT ACTGTCACTA CTTGGGCATC GAATTCTCAG GCCTTTAACG CTGCTTTCAT ACAGGCTATC ACTAAATTGG GTCGGGTCGG GGTCAAGACC
GGAGGAAATG GGAATATTCG TTTCGACTGT GGAAGGTTCA AT
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTCACACTC TAGGATTCTC ACACTGCACC CAAATCACGA ACCGGCTCTA CAATTTCAGC CCAGGAACCC CGGTCGACCC GACCCTAAAC CGGCAATATG CGACCCAACT ACAGGGTATG
TGCCCGCGGA ATGTGGATCC GAGAGTAGCC ATTGACATGG ATCCGACAAG TCCTAGGATA TTCGACAATG CGTATTTCCA GAATCTTGTA CAAGGAAAGG GTTTGTTCAC TTCGGATCAA
GTTCTTTTCA CGGATTCAAG ATCAAGAAAT ACTGTCACTA CTTGGGCATC GAATTCTCAG GCCTTTAACG CTGCTTTCAT ACAGGCTATC ACTAAATTGG GTCGGGTCGG GGTCAAGACC
GGAGGAAATG GGAATATTCG TTTCGACTGT GGAAGGTTCA AT
|
Retrieve as FASTA
|
|