Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
131 |
PWM (Da): |
14174.05 |
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PI (pH):
| 9.36 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGGHTLGFSH CSSFQNRIHN FSNKTDVDPT MNPSFATSLR QVCPKHNKVK SAGANLDSSP TVFDNAYFKL LLQGKSIFSS DQALITSSRT KALVAKFAAN QEEFFDAFVK SMIKMSSING
GGTEIRLDCR V
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (Large 5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCAGGAGGGC ACACACTAGG ATTCTCCCAC TGTTCGTCGT TCCAGAACAG AATCCACAAC TTTAGCAACA AAACCGACGT GGACCCCACA ATGAACCCGT CGTTCGCGAC AAGTCTAAGG
CAGGTTTGCC CGAAGCACAA CAAGGTGAAG AGTGCCGGAG CGAACTTGGA CTCTTCCCCG ACCGTTTTCG ACAATGCATA CTTCAAATTG CTTCTTCAAG GGAAGAGCAT TTTCTCCTCC
GACCAGGCTT TAATTACTTC TTCCAGGACA AAGGCTTTAG TCGCAAAATT CGCAGCCAAT CAGGAGGAGT TTTTCGATGC TTTTGTCAAG TCTATGATTA AGATGAGCAG CATCAATGGT
GGTGGCACTG AGATCAGGCT AGATTGCAGG GTT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCAGGAGGGC ACACACTAGG ATTCTCCCAC TGTTCGTCGT TCCAGAACAG AATCCACAAC TTTAGCAACA AAACCGACGT GGACCCCACA ATGAACCCGT CGTTCGCGAC AAGTCTAAGG
CAGGTTTGCC CGAAGCACAA CAAGGTGAAG AGTGCCGGAG CGAACTTGGA CTCTTCCCCG ACCGTTTTCG ACAATGCATA CTTCAAATTG CTTCTTCAAG GGAAGAGCAT TTTCTCCTCC
GACCAGGCTT TAATTACTTC TTCCAGGACA AAGGCTTTAG TCGCAAAATT CGCAGCCAAT CAGGAGGAGT TTTTCGATGC TTTTGTCAAG TCTATGATTA AGATGAGCAG CATCAATGGT
GGTGGCACTG AGATCAGGCT AGATTGCAGG GTT
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Retrieve as FASTA
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