Entry information : SbPrx73 (Sobic.004G105300 [2.1])
Entry ID 923
Creation 2006-01-04 (Christophe Dunand)
Last sequence changes 2014-08-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-26 (Christophe Dunand)
Peroxidase information: SbPrx73 (Sobic.004G105300 [2.1])
Name (synonym) SbPrx73 (Sobic.004G105300 [2.1])
Class Class III peroxidase    [Orthogroup: Prx356]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type Seedlings
Inducer Dark growth
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx73
start..stop
S start..stop
OsPrx25 420 1e-147 71..377 33..338
BdiPrx98 416 3e-146 48..377 8..334
SiPrx70 407 2e-142 64..377 50..353
OsPrx88 382 3e-133 66..377 17..318
Literature and cross-references SbPrx73 (Sobic.004G105300 [2.1])
Literature Cordonnier-Pratt,M.-M. et al., unpublished
DNA ref. Phytozome 12:   chromosome_4 (10009699..10011042) [Fragment]
EST ref. GenBank:   BE358999 [5' end]   BE359080 [3' end]
Protein sequence: SbPrx73 (Sobic.004G105300 [2.1])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   378
PWM (Da):   %s   38746.66  
PI (pH):   %s   8.72
Sequence
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Send to Peroxiscan
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MYPRHSPLPP LSLHFLLPSR DIVLHHLCSA LLTKCSPQSH PMAGGAVSAS LRTLVLLLLA IVSSPLAGRR TAAALSTKYY DKKCPGLQPA VRSAMARAVA ADPRAGASVL RLFFHDCFVN  GCDASVLLDD APAGEKGAAP NANSLRGFDV VDAAKAAADS ACGGPGTVSC ADVLALAARD AVSLLGGPSW AVRLGRLDAR TASRDAADAL LPGPASNLSS LVASFGAKGL SPRDMTALSG  AHTVGRARCV TFRGRVSGGG DDDPAASIDA GFAAQMRRAC PDGADGNNVA PLDAVTPDRF DNGYFQDLVQ RRGLLHSDQQ LFGGGGGGSS QDALVRKYAR DGAAFASDFA KAMVRMGNLA 
PAPGTPLEVR INCHRPN* 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs and genomic (chromo 4, no intron).
DNA
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ATGTATCCCC GTCACTCACC TTTGCCGCCA CTTTCACTTC ACTTCCTGCT TCCCTCTCGT GATATCGTCC TCCATCACCT TTGCTCTGCT CTGCTCACCA AGTGCTCACC TCAATCTCAT  CCCATGGCCG GTGGTGCCGT GTCTGCTTCG CTCAGGACCC TCGTGCTCCT TCTCCTGGCC ATCGTCTCTT CTCCCCTCGC CGGGCGGCGC ACGGCCGCAG CGCTGTCGAC CAAGTACTAC  GACAAGAAGT GCCCCGGCCT ACAACCCGCG GTGCGTTCCG CCATGGCGCG GGCGGTGGCG GCGGACCCAC GCGCGGGGGC GTCCGTGCTC CGCCTCTTCT TCCACGACTG CTTCGTCAAC  GGCTGCGACG CCTCCGTCCT CCTCGACGAC GCGCCCGCCG GCGAGAAGGG CGCGGCGCCC AACGCCAACT CCCTCCGCGG CTTCGACGTC GTGGACGCGG CCAAGGCCGC CGCGGATTCC  GCCTGCGGCG GGCCCGGCAC CGTCTCCTGC GCGGACGTGC TCGCGCTGGC CGCCCGCGAC GCCGTGTCGC TGCTGGGCGG CCCGTCGTGG GCCGTCCGGC TGGGCCGCCT GGACGCGCGC  ACCGCCAGCC GCGACGCCGC CGACGCGCTC CTCCCGGGCC CGGCCTCCAA CCTGTCGTCC CTCGTCGCCT CGTTCGGCGC CAAGGGCCTG TCGCCGCGCG ACATGACGGC GCTGTCGGGC  GCGCACACCG TCGGCAGGGC GCGCTGCGTC ACGTTCCGCG GCCGCGTCAG CGGCGGCGGG GACGACGACC CCGCCGCGTC CATCGACGCC GGCTTCGCCG CGCAGATGCG CCGGGCGTGT  CCGGACGGTG CGGACGGCAA CAACGTCGCG CCGCTGGACG CGGTCACCCC TGACAGGTTC GACAACGGGT ACTTCCAGGA CCTGGTGCAG CGACGGGGGC TGCTGCATTC CGACCAGCAG  CTCTTCGGCG GCGGCGGCGG CGGATCGTCG CAGGATGCGT TGGTGAGGAA GTACGCCCGC GATGGAGCCG CGTTCGCGAG TGACTTCGCC AAGGCGATGG TGAGGATGGG TAACCTGGCG 
CCGGCGCCCG GGACGCCGCT GGAGGTCAGG ATCAACTGCC ACAGGCCCAA CTAG 

Retrieve as FASTA  
CDS
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ATGTATCCCC GTCACTCACC TTTGCCGCCA CTTTCACTTC ACTTCCTGCT TCCCTCTCGT GATATCGTCC TCCATCACCT TTGCTCTGCT CTGCTCACCA AGTGCTCACC TCAATCTCAT  CCCATGGCCG GTGGTGCCGT GTCTGCTTCG CTCAGGACCC TCGTGCTCCT TCTCCTGGCC ATCGTCTCTT CTCCCCTCGC CGGGCGGCGC ACGGCCGCAG CGCTGTCGAC CAAGTACTAC  GACAAGAAGT GCCCCGGCCT ACAACCCGCG GTGCGTTCCG CCATGGCGCG GGCGGTGGCG GCGGACCCAC GCGCGGGGGC GTCCGTGCTC CGCCTCTTCT TCCACGACTG CTTCGTCAAC  GGCTGCGACG CCTCCGTCCT CCTCGACGAC GCGCCCGCCG GCGAGAAGGG CGCGGCGCCC AACGCCAACT CCCTCCGCGG CTTCGACGTC GTGGACGCGG CCAAGGCCGC CGCGGATTCC  GCCTGCGGCG GGCCCGGCAC CGTCTCCTGC GCGGACGTGC TCGCGCTGGC CGCCCGCGAC GCCGTGTCGC TGCTGGGCGG CCCGTCGTGG GCCGTCCGGC TGGGCCGCCT GGACGCGCGC  ACCGCCAGCC GCGACGCCGC CGACGCGCTC CTCCCGGGCC CGGCCTCCAA CCTGTCGTCC CTCGTCGCCT CGTTCGGCGC CAAGGGCCTG TCGCCGCGCG ACATGACGGC GCTGTCGGGC  GCGCACACCG TCGGCAGGGC GCGCTGCGTC ACGTTCCGCG GCCGCGTCAG CGGCGGCGGG GACGACGACC CCGCCGCGTC CATCGACGCC GGCTTCGCCG CGCAGATGCG CCGGGCGTGT  CCGGACGGTG CGGACGGCAA CAACGTCGCG CCGCTGGACG CGGTCACCCC TGACAGGTTC GACAACGGGT ACTTCCAGGA CCTGGTGCAG CGACGGGGGC TGCTGCATTC CGACCAGCAG  CTCTTCGGCG GCGGCGGCGG CGGATCGTCG CAGGATGCGT TGGTGAGGAA GTACGCCCGC GATGGAGCCG CGTTCGCGAG TGACTTCGCC AAGGCGATGG TGAGGATGGG TAACCTGGCG 
CCGGCGCCCG GGACGCCGCT GGAGGTCAGG ATCAACTGCC ACAGGCCCAA CTAG 

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