Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
141 |
PWM (Da): |
16095.16 |
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PI (pH):
| 8.83 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PPKLFFSENN FFWLVGAHTL GTSHCATIQY RFDAPWIINT DQEFYKKLQK ICPKGAASNF NTSLPNDRTP YVFDADIYVE SLRGRGLLVT DVAHR*DRPE IYFRQRLFFK TFSSAFVKLS
TADVLTGNDG EIRRQCDKLN GV
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (3' end is missing. Gaps in frame. Stop in frame). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTGTAGGTG CTCATACTCT TGGAACTTCT CATTGTGCCA CTATACAATA TCGTTTCGAC GCTCCGTGGA TTATAAATAC GGACCAAGAA TTCTATAAGA AATTGCAAAA GATTTGTCCG
AAAGGAGCAG CATCTAATTT TAATACGTCG TTACCTAACG ATCGCACACC GTACGTATTC GATGCAGATA TATATGTGGA ATCATTACGT GGGAGGGGGC TATTAGTGAC CGATGTAGCT
CACCGCTGAG ATCGCCCCGA AATTTATTTT CGACAAAGAT TATTTTTCAA GACATTTTCA TCTGCTTTTG TTAAACTTTC AACCGCAGAC GTTTTAACGG GAAACGATGG CGAAATCCGA
AGACAGTGTG ATAAGTTGAA TGGAGTT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTGTAGGTG CTCATACTCT TGGAACTTCT CATTGTGCCA CTATACAATA TCGTTTCGAC GCTCCGTGGA TTATAAATAC GGACCAAGAA TTCTATAAGA AATTGCAAAA GATTTGTCCG
AAAGGAGCAG CATCTAATTT TAATACGTCG TTACCTAACG ATCGCACACC GTACGTATTC GATGCAGATA TATATGTGGA ATCATTACGT GGGAGGGGGC TATTAGTGAC CGATGTAGCT
CACCGCTGAG ATCGCCCCGA AATTTATTTT CGACAAAGAT TATTTTTCAA GACATTTTCA TCTGCTTTTG TTAAACTTTC AACCGCAGAC GTTTTAACGG GAAACGATGG CGAAATCCGA
AGACAGTGTG ATAAGTTGAA TGGAGTT
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Retrieve as FASTA
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