Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
326 (307) |
| PWM (Da): |
35967.14 (33849.0) |
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| PI (pH):
| 6.78 (6.98) |
Peptide Signal:
| cut: 20 range:20-326 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAVPILLLLL FFSIPFSESK LSEDYYKQTC PDFQKIVRET VTIKQAGQPV TAAGTLRLFF HDCMVEGCDA SVFIASNHVN KAERDADINQ SLSGDAFEVV VRAKTALELT CPGIVSCADI
LAEATRDLVT MVGGPFYPVK LGRKDGQVSL ASKVDANLPK TNQTMDEIIK LFADKGFTIE EMVALTGGHT IGFSHCKEFT DRLFHYSPTT PTDPVMNPRF AEGLKKTCAN YTTNPAMSAF
NDVITPGKFD NIYYQNLKRG LGLLSSDHAL VKDPRTMPLV ELYSKNQEAF FKAFGHAMEK LGHHEIKTGQ QGEVRRRCDA FNTIQA
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing which has been completed). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGTTC CTATACTTCT CCTCCTCCTC TTCTTCTCTA TCCCCTTCTC CGAATCTAAG CTCAGCGAAG ACTACTACAA GCAAACATGT CCAGATTTCC AGAAAATTGT AAGAGAAACC
GTGACCATAA AGCAAGCCGG CCAACCCGTC ACCGCTGCCG GCACTCTCCG CCTCTTCTTC CACGACTGCA TGGTCGAGGG ATGCGACGCT TCCGTCTTCA TCGCCTCCAA CCATGTCAAC
AAAGCTGAGC GAGACGCCGA CATCAACCAA TCCCTGTCAG GTGACGCCTT CGAGGTGGTC GTCCGTGCCA AGACCGCGCT CGAGCTCACC TGCCCGGGAA TTGTCTCGTG CGCAGACATT
CTCGCAGAGG CCACCCGTGA CCTCGTCACA ATGGTCGGCG GGCCTTTCTA CCCCGTCAAA TTAGGACGAA AAGATGGACA GGTGTCCCTA GCGTCCAAGG TTGATGCAAA CTTGCCAAAA
ACAAACCAAA CCATGGATGA GATTATCAAG CTATTTGCTG ACAAAGGTTT CACAATCGAA GAAATGGTGG CTTTGACAGG TGGACACACA ATTGGGTTTT CTCATTGCAA GGAGTTCACC
GATAGGCTTT TCCATTACAG CCCGACTACA CCAACAGACC CAGTAATGAA CCCAAGATTC GCCGAAGGGT TGAAGAAGAC TTGTGCTAAT TACACAACTA ACCCTGCCAT GTCTGCCTTC
AACGACGTCA TCACACCTGG CAAGTTTGAC AACATATATT ATCAGAATTT GAAGAGGGGG TTGGGGCTGT TGTCTTCAGA CCATGCACTT GTCAAGGACC CAAGAACAAT GCCTTTGGTG
GAGTTGTACT CTAAGAACCA GGAAGCGTTT TTCAAGGCTT TCGGTCACGC AATGGAGAAG CTTGGCCATC ATGAGATCAA GACCGGACAA CAGGGTGAGG TGAGGCGCAG GTGTGATGCG
TTTAACACGA TTCAGGCTTA G
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGTTC CTATACTTCT CCTCCTCCTC TTCTTCTCTA TCCCCTTCTC CGAATCTAAG CTCAGCGAAG ACTACTACAA GCAAACATGT CCAGATTTCC AGAAAATTGT AAGAGAAACC
GTGACCATAA AGCAAGCCGG CCAACCCGTC ACCGCTGCCG GCACTCTCCG CCTCTTCTTC CACGACTGCA TGGTCGAGGG ATGCGACGCT TCCGTCTTCA TCGCCTCCAA CCATGTCAAC
AAAGCTGAGC GAGACGCCGA CATCAACCAA TCCCTGTCAG GTGACGCCTT CGAGGTGGTC GTCCGTGCCA AGACCGCGCT CGAGCTCACC TGCCCGGGAA TTGTCTCGTG CGCAGACATT
CTCGCAGAGG CCACCCGTGA CCTCGTCACA ATGGTCGGCG GGCCTTTCTA CCCCGTCAAA TTAGGACGAA AAGATGGACA GGTGTCCCTA GCGTCCAAGG TTGATGCAAA CTTGCCAAAA
ACAAACCAAA CCATGGATGA GATTATCAAG CTATTTGCTG ACAAAGGTTT CACAATCGAA GAAATGGTGG CTTTGACAGG TGGACACACA ATTGGGTTTT CTCATTGCAA GGAGTTCACC
GATAGGCTTT TCCATTACAG CCCGACTACA CCAACAGACC CAGTAATGAA CCCAAGATTC GCCGAAGGGT TGAAGAAGAC TTGTGCTAAT TACACAACTA ACCCTGCCAT GTCTGCCTTC
AACGACGTCA TCACACCTGG CAAGTTTGAC AACATATATT ATCAGAATTT GAAGAGGGGG TTGGGGCTGT TGTCTTCAGA CCATGCACTT GTCAAGGACC CAAGAACAAT GCCTTTGGTG
GAGTTGTACT CTAAGAACCA GGAAGCGTTT TTCAAGGCTT TCGGTCACGC AATGGAGAAG CTTGGCCATC ATGAGATCAA GACCGGACAA CAGGGTGAGG TGAGGCGCAG GTGTGATGCG
TTTAACACGA TTCAGGCTTA G
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Retrieve as FASTA
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