Entry information : RcPrx03 (27446.m000493)
Entry ID 9335
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2012-01-03 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-01-03 (Qiang Li)
Peroxidase information: RcPrx03 (27446.m000493)
Name (synonym) RcPrx03 (27446.m000493)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx03
start..stop
S start..stop
RcPrx02 474 9e-171 41..291 81..331
MePrx89 438 3e-156 10..291 14..334
MePrx80 433 2e-154 10..291 14..334
MePrx141 419 9e-149 1..291 1..335
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 132059..132157 99 N° 2 132175..132882 708  
join(132059..132157,132175..132882)


exon

Literature and cross-references RcPrx03 (27446.m000493)
DNA ref. Phytozome 12:   27446 (132059..132882)
Protein sequence: RcPrx03 (27446.m000493)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   291 (265)
PWM (Da):   %s   31566.67 (28788.3) Transmb domain:   %s   i12-34o
PI (pH):   %s   7.47 (7.54) Peptide Signal:   %s   cut: 27 range:27-291
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSDRILSYSCIAFLLFCSLATLASASLTVGFYMDGKLQLAVLIPEETPRVLPLDRHVANNPSLRGFEVINEAKAQLEAICPQTVSCADILAFAARDSSFKLGGINYAVPAGRRDGHVSNVDEVAQNLPPFFFNAQQLADNFARKGMSADEMVTLSGAHSIGISHCSSFSGRLYSFNATHPQDPSMDPRYAAFLKTKCPPPNNNGDPTVPLDPTPNRMDNKYYVELTRNRGLLISDQTLMNSPSTQRMVVNNARNGATWAAKFAKAMVHMGSLDVLTGTQGEIRNQCHVVN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (A long sequence in frame is missing which has not been found yet).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTCTGATAGAATATTGTCATATTCTTGCATTGCTTTCCTTTTGTTTTGCTCATTGGCTACTTTGGCATCTGCATCCCTTACAGTTGGTTTTTACCANNNNNNNNNNNNNAGAGAC
ATGTAGCAAATAATCCTAGCTTACGGGGTTTCGAAGTGATTAATGAAGCTAAAGCCCAACTTGAAGCCATTTGTCCACAAACTGTATCATGCGCAGACATTCTTGCATTCGCTGCTCGTG
ACAGTTCCTTCAAGCTTGGAGGGATAAACTACGCTGTGCCAGCAGGAAGGCGAGATGGACATGTTTCAAATGTAGATGAAGTAGCACAAAATCTTCCTCCATTCTTCTTCAATGCACAGC
AATTAGCAGACAATTTCGCACGTAAAGGAATGTCAGCCGATGAGATGGTGACGCTATCAGGAGCACACTCTATTGGCATCTCACATTGTTCTTCATTCTCTGGCCGCCTCTACTCTTTCA
ACGCCACTCATCCTCAAGATCCCTCCATGGACCCAAGATACGCAGCTTTCTTAAAGACTAAGTGCCCACCACCTAATAACAATGGTGACCCAACTGTACCACTTGATCCTACTCCTAATC
GTATGGACAACAAATACTACGTTGAGTTGACCAGGAATCGCGGATTATTGATTTCCGACCAGACACTGATGAACAGCCCGTCCACACAAAGGATGGTGGTGAACAATGCAAGGAACGGTG
CAACTTGGGCTGCCAAGTTCGCAAAGGCAATGGTGCATATGGGGTCCCTTGATGTTCTTACAGGAACTCAAGGTGAAATCAGGAATCAATGCCACGTGGTGAAT

Retrieve as FASTA