Entry information : RcPrx07 (28159.m000016)
Entry ID 9338
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx07 (28159.m000016)
Name (synonym) RcPrx07 (28159.m000016)
Class Class III peroxidase     [Orthogroup: Prx023]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx07
start..stop
S start..stop
MePrx135 248 4.62e-84 1..142 187..328
GrPrx41 241 4.16e-81 1..142 191..332
GhPrx41 234 1.08e-78 1..142 190..331
PpePrx79 232 1.18e-77 1..142 190..332
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9338' 'join(4659..4665,6171..6589)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4659..4665 5 N° 2 6171..6589 417  
join(4659..4665,6171..6589)


exon

Literature and cross-references RcPrx07 (28159.m000016)
DNA ref. Phytozome 12:   28159 (4659..6589)
Protein sequence: RcPrx07 (28159.m000016)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   142
PWM (Da):   %s   15322.55  
PI (pH):   %s   8.5
Sequence
Send to BLAST
Send to Peroxiscan
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MARGHTIGLAKCATFSNRLFNFSGTGAPDATLESNMLSDLQNLCPITGDGNRTTALDRNSTDLFDNHYFQNLLNNKGLLGSDQILFSSNEAVSTTKSIVQSYSSNSKLFLDDFANSMIKM
GNIRPLTGSSGQIRKNCRVVN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing which can not be found due to the 'NNNNN' in DNA).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACACGTAATTGCCTATAAAAATATAGCTATTGCAAGTTTAATTGGCCATTATAATCTTATTAGGGTTTCTTCTGTAGCATTTGCAGTGAAGACATGAAGAGTTTAAGCTACTATC
AATATTACCTCTTGTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCTATTTTTGTGAGTGACTTGTATGAAATGGAAGAATTCTCATTAAATAGAAGTCATTTTAATGAGTAGAAACCGAATAAATATATAAAATTCTTG
TTATATTATTGGTACTATCTCAACATTTTGATATCATATAATTATTTCTTATTTGTTTTTTGTGTCAAGTGTAGGTGGTCATACAATTGGTCTAGCAAAATGTGCAACTTTCAGCAATAG
ATTGTTCAACTTCTCAGGAACTGGTGCTCCTGATGCTACACTTGAATCTAATATGTTATCTGATCTGCAAAATCTATGTCCAATAACTGGAGATGGAAACAGGACAACTGCTCTTGATCG
GAACTCTACTGATCTTTTCGACAACCACTATTTCCAAAATCTGCTAAACAACAAGGGTCTCCTTGGTTCAGACCAAATCCTATTTTCAAGTAATGAGGCTGTTTCCACTACCAAAAGTAT
TGTCCAAAGTTACAGCAGCAACAGCAAGCTTTTCTTGGATGACTTTGCTAATTCCATGATCAAAATGGGAAATATTCGTCCACTTACAGGGTCTAGTGGGCAGATTAGGAAGAATTGCAG
AGTTGTTAATTCT

Retrieve as FASTA  
CDS
Send to BLAST
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ATGGCACGTGGTCATACAATTGGTCTAGCAAAATGTGCAACTTTCAGCAATAGATTGTTCAACTTCTCAGGAACTGGTGCTCCTGATGCTACACTTGAATCTAATATGTTATCTGATCTG
CAAAATCTATGTCCAATAACTGGAGATGGAAACAGGACAACTGCTCTTGATCGGAACTCTACTGATCTTTTCGACAACCACTATTTCCAAAATCTGCTAAACAACAAGGGTCTCCTTGGT
TCAGACCAAATCCTATTTTCAAGTAATGAGGCTGTTTCCACTACCAAAAGTATTGTCCAAAGTTACAGCAGCAACAGCAAGCTTTTCTTGGATGACTTTGCTAATTCCATGATCAAAATG
GGAAATATTCGTCCACTTACAGGGTCTAGTGGGCAGATTAGGAAGAATTGCAGAGTTGTTAATTCT

Retrieve as FASTA