Entry information : RcPrx07 (28159.m000016)
Entry ID 9338
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx07 (28159.m000016)
Name (synonym) RcPrx07 (28159.m000016)
Class Class III peroxidase     [Orthogroup: Prx023]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx07
start..stop
S start..stop
MePrx135 248 5e-84 1..142 187..328
GrPrx41 241 4e-81 1..142 191..332
GhPrx41 234 1e-78 1..142 190..331
PpePrx79 232 1e-77 1..142 190..332
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4659..4665 7 N° 2 6171..6589 419  
join(4659..4665,6171..6589)


exon

Literature and cross-references RcPrx07 (28159.m000016)
DNA ref. Phytozome 12:   28159 (4659..6589)
Protein sequence: RcPrx07 (28159.m000016)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   142
PWM (Da):   %s   15322.55  
PI (pH):   %s   8.5
Sequence 189
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARGHTIGLAKCATFSNRLFNFSGTGAPDATLESNMLSDLQNLCPITGDGNRTTALDRNSTDLFDNHYFQNLLNNKGLLGSDQILFSSNEAVSTTKSIVQSYSSNSKLFLDDFANSMIKMGNIRPLTGSSGQIRKNCRVVN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing which can not be found due to the 'NNNNN' in DNA).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACGTAATTGCCTATAAAAATATAGCTATTGCAAGTTTAATTGGCCATTATAATCTTATTAGGGTTTCTTCTGTAGCATTTGCAGTGAAGACATGAAGAGTTTAAGCTACTATCAA
TATTACCTCTTGTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCTATTTTTGTGAGTGACTTGTATGAAATGGAAGAATTCTCATTAAATAGAAGTCATTTTAATGAGTAGAAACCGAATAAATATATAAAATTCTTGTT
ATATTATTGGTACTATCTCAACATTTTGATATCATATAATTATTTCTTATTTGTTTTTTGTGTCAAGTGTAGGTGGTCATACAATTGGTCTAGCAAAATGTGCAACTTTCAGCAATAGAT
TGTTCAACTTCTCAGGAACTGGTGCTCCTGATGCTACACTTGAATCTAATATGTTATCTGATCTGCAAAATCTATGTCCAATAACTGGAGATGGAAACAGGACAACTGCTCTTGATCGGA
ACTCTACTGATCTTTTCGACAACCACTATTTCCAAAATCTGCTAAACAACAAGGGTCTCCTTGGTTCAGACCAAATCCTATTTTCAAGTAATGAGGCTGTTTCCACTACCAAAAGTATTG
TCCAAAGTTACAGCAGCAACAGCAAGCTTTTCTTGGATGACTTTGCTAATTCCATGATCAAAATGGGAAATATTCGTCCACTTACAGGGTCTAGTGGGCAGATTAGGAAGAATTGCAGAG
TTGTTAATTCT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACGTGGTCATACAATTGGTCTAGCAAAATGTGCAACTTTCAGCAATAGATTGTTCAACTTCTCAGGAACTGGTGCTCCTGATGCTACACTTGAATCTAATATGTTATCTGATCTG
CAAAATCTATGTCCAATAACTGGAGATGGAAACAGGACAACTGCTCTTGATCGGAACTCTACTGATCTTTTCGACAACCACTATTTCCAAAATCTGCTAAACAACAAGGGTCTCCTTGGT
TCAGACCAAATCCTATTTTCAAGTAATGAGGCTGTTTCCACTACCAAAAGTATTGTCCAAAGTTACAGCAGCAACAGCAAGCTTTTCTTGGATGACTTTGCTAATTCCATGATCAAAATG
GGAAATATTCGTCCACTTACAGGGTCTAGTGGGCAGATTAGGAAGAATTGCAGAGTTGTTAATTCT

Retrieve as FASTA