The peroxidases and oxidases database
Entry information : RcPrx12 (28691.m000035)
Entry ID 9343
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2012-01-04 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: RcPrx12 (28691.m000035)
Name (synonym) RcPrx12 (28691.m000035)
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx12
start..stop		 S start..stop
PtPrx102 414 8e-147 1..271 72..343
PalPrx04 409 3e-145 1..271 66..337
MePrx57 409 8e-145 1..269 80..348
PkPrx04 405 2e-143 1..271 72..343
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20932..21123 192 N° 2 10733..10901 169 N° 3 9902..10353 452  
complement(join(9902..10353,10733..10901,20932..21123))


exon

Literature and cross-references RcPrx12 (28691.m000035)
DNA ref. Phytozome 12:   28691 (21123..9902)
Protein sequence: RcPrx12 (28691.m000035)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271
PWM (Da):   %s   29070.4  
PI (pH):   %s   4.3
Sequence 342
Send to BLAST
Send to Peroxiscan
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GCDGSLLLDNSATIESEKEALGNNNSARGFEVVDTMKSLLEAACPQTVSCADILTIASQESVTLTGGPSWTNLLGRRDSITANRTLANMNIPGPFDTLERLKFRFSNVGLNNDTDLVALSGAHTFGRAQCRTFIGRLYNFNNTGLPDPTLDPTYLETLRQICPQGGDGRVLANLDPTTPDTFDKNYFSNLQVNKGLLQSDQELFSTPGADTITIVNNFGNNQTAFFEAFVVSMIRMGNLSPLTGTDGEIRLNCRVVNAPPAEADILPVSS

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing which has not been found yet due to the NNNN in DNA).
DNA ►
Send to BLAST
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GGTTGTGATGGATCGCTTTTGTTGGACAATAGTGCTACTATAGAGAGTGAGAAAGAAGCTCTTGGCAACAACAACTCTGCCAGAGGTTTCGAAGTTGTGGACACCATGAAATCCCTGTTG
GAGGCTGCTTGTCCTCAAACTGTTTCTTGTGCTGATATTCTCACTATTGCATCTCAGGAATCTGTTACTTTGGTAATCTTACTTTTCCTCTTCTTTCTACTTTTAACTTTTTTTTAGTAA
TTAACTATTAATCCAGCGCATATACGGTTTTGAAAACCCGATTATTCATATATTTAGATTTGATAAGAGTCTTTTTCATTTATATCTCACGTGTATATAGCAGTGAATAAAATTTAACCG
AATCGATCAGCTCGGTTTTTATTCTGAAAAGAATTAAAATAATTCGGTCTGATTTTATCAAAAATCTCAGTTAAATGGAAGCAAATAATTTTTTTTTTATTTTTATAGTAAAATTTAAAA
TTTTAAAGGACATTGTTTATATTATTTAGTTAATGTTTTGTAAATATAATTTTTTTATTGGATATTCCTCAAAACTATAAGTATGTTAATAAATTTTAATTTGATCTAAGAAATTCAAGT
AATTTAAAGAACTAAATCAAAACGAAATTATTTGATAAAATCTTGAAAAATTTCAAATTTTTAGTCTTTTCCAATTCAATTTAATAGACCGATCATTTGCTCACCTCTAATATTTTAAAT
AGCCAATCTTGTCTACCCCAATTTCTCTTATAACTAGCAAGTGAAAAGCTTTTTGAGTTCATTTATCTCATTTCTCTATTAGAAAATAGAGATTAAAGAATTATTAATTAATTATTTTTT
TATGACGAAACTAAATTTACAGGAAATTCTAGAACCATGCCCAATTAATTAGGCTGTCCAATAAAATAAAATAAAATAAAAATGACAAGTTACATTAGATAAGGTAAAGAAAAGAATATG
TTCATAGCCAAAGTATACAAGGTTTTAGTAGGTCACCATATCTATTATTAATATGCTTCCAATATGTCTCTTTCTTTTGTAAATTATATACTAATGCTTGTAATTTTATATAAATTTTCT
AGTTCTAGTGGTTGGACCGTTTGAGATCATTTTTTTGTCATATAGTTCATAAAAACCAGTAATTTACATTGTTTTTTGAAAATAATTTTAATAATTTAAAAGGAAATTTAAAAAGTAATT
TTACTTACCATAATGAGAAACAGGTTGTGGTTTAATAATTCAAAGTGTATTATTTTATTGACTAATAAGAAAAAGATTATGAAAACACTTTTCTGACTTTTAAGGTTGATTTTATCATGT
GCTTAACAAATATCATTGACAATAATTTTAATATTTTTAAGAATTGGAACGTGTAAGACACGAGAAACTATACATAAAACAACTACTTCACATAAAAAGACTATAAATTATAGCTTTTAA
CTGAAATGTGAAAGAGGGGTTTTCTTTTATATATATGCGATAATTACTAAATAAATTCTGAATTTTTAATTTTTAATTAATTTAATTTAATTATTTTAGAATTTAAATAATACTTATACT
TTTAATTTAATTTTAAAGCACTTTCAGTATGATTTTAAAATTTATATAAAAAATACATTATATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTAATGAAATA
AAAAATAAATAAAATTATAAATAACATAATTAGTTATATAAGAATTAAATTTAGTATTTTAAATCTTCTTATAATAGAATCTTTTATGGTTAATATGTTATCTATATAAATTAATAAAAA
TATATAGCTAATATCTTATTTTTAAAATAAGATAATTATTTAACTATAAATTAATATAATAATTATATTTATACAAAATATAATAAATACAGTGTCTTTTATCTTTTTTTTATATGAATA
CATAATAGTCCTATATTATATTAATAAAATATGTTAGACACGTACTAAAATATATCTTTTTTGCTAAATATAGAAAAAATAAGAGAAAAAAGAAAATAAAAAGAAAAATAAATAAATTTT
ATTTTTTATATTTTGATAAAAAGAGAAATATTTTTTTAAAAAAAAACTGATATTAGAAATATAAATTTTTATTTTTTATAAATTATTATAAAAATAAAATAATAATTTACGCTATTTATT
TTATTTTATTTCAGAAAAATATAATTTTTCGAGCCCATAAATTATCATATTTGCTTTATTTTTCTTATTATTCTTTTCTTCATTTTCAAACAAGTAATCCTTTCCCCCTCTTATACTCCT
CTTTGTTGTTCTTTATTTTTTTCAAAAATAGGTTTAAACTCCTTTTCTTTGTTAGGAATGGCTCAATTTGTTTATTTTATATAGACTTGAATTACTATCTTAATATTTAATGAATTAATG
AATTCAAAAGTTTGAATTTAAGTTCCTTAATAATCAAGGGTGTTTGGAAATCCATGTCATGTCATCTCCAGTTTGATCTTATCTTGTTTATTTTTCTAGGAACAATAAGAAAGAATAAAC
GGATTTCTTTTGATCCTTTCTTTCTGACAGGTTGCCGCATCAAATGGATTAAAGATAGTCTACACATTTATTTATTTATCTTTTTTTTTTTTTCATTTTCAAACTACAAAGAGTTAAAAT
TGTTTATAAGCTATTTGAAAAAATAAAATCTCATTTGAATTCGTTTAGTAAATAAATTAAATTTAAAAAATAAAAATATAATTTATTTAAATTAACTCTTAAACTAAATATCTAATAATA
ACCTTATAAAATTTATATATTTTACTTATAATAAGTATAAATTATTTATTTAAATTTATTAATTATAATAAAATCATAACTTTTATTAAATATATTGTTTTATTAATATATATTTTATAT
TTATAATTAATTAACAAATAATGTAATTTATAATTTATAATCTTTTTGCTTGTTTAGAGTCTTGAGATATGAAAGTAATTTAATATATTGAGTTCGAATTTAGTACAATAATAAACAAGT
CAATCCTAAATTAGTTAAAACTGACTAAAATTAACCGGATTCGATTTAATTATATTTATAAATACATCCGATCACTAATATTTAAATAGTGATTAAAGAAATTATATATATTAGAATTTT
ATTAATAAAACCTTTTCAACCGTAGTTGATATTTTCTTATAAATAATTTTGATAATTTCTTTAATAGACACTTACTTTCACAAGGTAGTGTTGTTAATTGTTTTTCTTTTCAATTACCAT
TGCAAGTTTTAGGAGAAAGATAAATTAATTAAAATAGAAAAATTTAAAATAACTCGAAAAAAAATGATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGTCAGGA
TTCTTCCCTTGATTTTTTATTTTATTTTACTTTATTTTTGAATTGTAGTGTTCTTTATTAATTGCAATCCTTCCAAATTCTTTTATGATGGAAGAAAACTTAAACAAGAAGACCAAATAA
GCAAACCACAAGACTAAATCAAGGCTATTTAACTTTTTGTAATTAAGTTATAATAATCTACAAGAAAGTCTATGTCCTTGCGGTTACATATTAATCCAAAAATTAAATATTTCAGTTTCT
ATAAAGCTCTCTTAAAGTAATTAAACTTGATTATGAATGAGTACTTCTTTTCTTTTGAAAAATATTATAAATGAGTACTTAGCAAGTATATTTAATTCTTCTTGATAAATATAATCTTTT
ATTTATATATAAAAGAAAAATATATCAATAAACCGTAAAATTATTTAAAATAAGAAGACTTATCAAAACATCTAGAAATCTATATATATATATATAATAAAAATGATGTTATGTAAGGAT
ATATTTTGATACCATTAATTATAAAAGGAATAATGTTCAATTTGGTTCTGCTTTTGTTACACGGATTTAATTTAATTTAATTTTATTTTAAATATGTGAATTTTTTAATTTAAATTTTTT
TATATTTAGTTCAAATTAATTCTATTTTTAAAAAAAAAAGTGGGAGTCATTCTCTCTTGAAAATAAAAATAAATAATAATCTATAATATTTTTTAAAAACTATTTTATACTTTTAGTACA
ATCAATATAATTAAGTAATAAATAGCTATTACCACTATTATTCTTGCTAAAAGTGCTCTCACATCTAACATCTTCAGTACCATCATTACTGTAATTGTCTTTTTCACTGTCATTATTAAG
AAAAAACAGTAAGGACATTGTAGGAATATTTGATCTTTTATTATATTTTATTTAAAATATTTGATCTTTTATTATATTTTATTTAAATATCAATGTATATTTTTTAATTTAAGTAATTTA
ATATAAGAAATTAATATTTTTTATTTTTTCATTATATTTACTCTCTTTTTAGAGAGTGTATAATTCACTCTCTTATTTTTTTTTTAAATAGAGCTAATTTGAGCTAAACATACAAAAATT
TGAATTAAAATGTCTATAAATTTAAAAGATTAAATACATTGAACCTGAATAATAAAGTTAATAGTCAAATTAGACTTTATTCCATCGTGTAAAAACAAAAAGAAAAAAGAACATTAGTAC
AATCATAACCTAGAAGACCAATTAGTTTGCCCCCACAATCTAACTTGGTGAACAAGAAGACACAATATATACATATATATATATATATATATATATATATAGGTACTATAGCTAAGATAT
CAAGCAAAGCACATGACTAAATCAAGGTTAATTGACTATTTGTGATCAAGTTAATTATGATAATGTAGAAGAAAGTCTATATGTTTGAAATCAAAGACAAGGAACTATAGGCATCCATAT
GGAATATATTCCATAATATATCAAAACTATAAGTTATAATCATCATGGAATTAATAATTAAATTCCAAGTACATTAATGTATTAGTTGACAAGCAACAGTTTTTGGAATATTAATACTGC
CCCCACCTACCTGCCTCCGGTTATCCTTGCACTAGTAACATACACCATCTAATTAAGCCTCCATGTTTTTAGCCGAAATTTAATTTTTTTTTAATATATATACTTAAGAAAATAATTTAT
TTTTATTGTTTAGTTATATATATATATATATATATATATATATATATATATATATATATAAGTATAAAATAAGAACGTACAAATTTATTAAAATGGCTTTATTGATTGTTTAATTAATTA
GATTGTTTATTAATTAATTTTGTCATAAAGAATATTGATAATTAATTAAATATAAGTCTAATTTTATTAAAATAAATAAATTAAAATTTATAATTAACTAATAGTTAAGAGAATTATAAA
TTTCACATATTAAATTTACGTGCACTATATGGAAAAAATTGGTATCTCTACATAATTCTTTTTTGTCATCAAAAAAACCTTATTTATGATTGCTAAACTTGTAGGATCGTTAGACTTTGA
GCGAAGATGATCCCTTCATTAAGGAGTTGTTTATTTTTCTTAATGTAAATATATATTTAGAGTTAATTTAAAATGTGCTGGATATGATTTTTACGGATAATAAATATTGCTTTAAGTGTT
TTAACATAAATACATATTAAGGTTCTAACTCAAACTCTAGTTAAGTTAAAAACTCTCACCTCTTACATTCTTTGATAAAAAAACTCTTTTTTTTAATAATAATTTTGGTCAATCTTATGT
TATTTTATGACAAACAGAAACATTGCTTGCACAAACAAGGAAAACACAAAGTCAAATTGCAGGACATGCTATCACATTTATTTTGTTTTAAATACTGAAAAGAAACCAAGAATTCAAATA
GTTAAAAAAAAAATAGAAAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAATCTCATTGAGGCTTCTTTTGGTATAGTTTTTCAGAGTAAAGATTATGATTTATTTTTTTAATTCTTTTAGTAATTTCGAAAATGATTTTTGAAAGAACTT
TCAAAAATTAAATTCAGAAAAATAAATTTTAAAAGATTTAAAATATAAAAAAAAAAGAATGAAAAGGCTAAGTTGGAAAATCATATCCAACTAACTAGGTTCAAATTAATTTCAAACTGT
ATATTTATTTACATTGTGCTTGCATGCTTTCTAAATGATTTTCCTGTTGAAAGAAAGTAAAAGTTTAATTCATTTATTTATTTCAGGGTTGTGATGGATCAATCTTATTGGATAAAACTG
ATACTATAGACACTGAGAAAGAGGCAATTGCCAACAACAATTCTGCAAGAGGTTTTGATGTTATTGATACAATGAAGGCCAGACTGGAGAGTATTTGTCCTGCTACTGTTTCCTGTGCTG
ATATTCTAACTATTGCAGCTCAAGAATCTGTTACTCTGGTAATATAGATTTTTTTACTTGCCTAATTAACCCTTTTAACCGAAATAACTATTCTGAAACTTGATAGAAATAATGGAATAG
TTATTATGATTATTATCTGCAGACAGGAGGTCCATCATGGACTAATTTACTTGGGAGAAGAGACAGCATAACAGCTAATAGAACTCTGGCTAATATGAACATTCCAGGGCCCTTTGACAC
CCTTGAAAGGCTAAAATTCAGGTTCTCTAATGTTGGCCTCAACAATGATACTGATTTGGTTGCATTAAGTGGTAATTATTTATTATTTCTTCTCTATTCTCCAATAATTATGCTAAGAAA
TTTAAAAATAAAAAAAAATAAAAAGAATATATGATATATTGTTAACGACAATAATAGAGCAACACTTTTTGCTTGGTATAATTCCATGAAAATCATAAGATATGAAGTTATTGTCCTTCA
CTTCTGACTTTTGAGTTTTATAGGGGATGCTGTTCATATAATAATAATAGAAAGGAGTATGTTATAGTTCTCTATGTCTGATAATGTGTCTTCCAATCTTGTAAATATTTATTAGAATCA
TCAGATTAGTACTTATGTGGGAAAGGTACCCAACAGCTGAATTTAAATAAGGTATTTTAAAGATTTTTTGTAATTGTTTTTTTCTTGTAGGTGCTCACACATTTGGACGAGCTCAATGTA
GAACATTCATCGGCCGTTTATACAACTTCAACAACACTGGTCTTCCAGATCCAACACTGGACCCAACTTACCTGGAAACTCTTCGCCAGATATGTCCGCAGGGGGGAGATGGAAGAGTCC
TAGCTAATCTTGATCCAACAACACCTGATACTTTTGACAAAAACTATTTCTCCAATCTTCAAGTTAACAAGGGCCTTCTTCAAAGTGATCAAGAACTATTTTCAACTCCTGGTGCTGACA
CCATTACCATTGTTAACAACTTTGGGAATAACCAAACTGCTTTCTTTGAAGCCTTTGTTGTTTCCATGATCAGAATGGGTAATCTCAGCCCTCTGACAGGAACTGATGGTGAGATCAGGT
TGAATTGCAGGGTTGTTAATGCACCTCCAGCTGAAGCAGATATTCTTCCTGTCAGCTCAATG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTGTGATGGATCGCTTTTGTTGGACAATAGTGCTACTATAGAGAGTGAGAAAGAAGCTCTTGGCAACAACAACTCTGCCAGAGGTTTCGAAGTTGTGGACACCATGAAATCCCTGTTG
GAGGCTGCTTGTCCTCAAACTGTTTCTTGTGCTGATATTCTCACTATTGCATCTCAGGAATCTGTTACTTTGACAGGAGGTCCATCATGGACTAATTTACTTGGGAGAAGAGACAGCATA
ACAGCTAATAGAACTCTGGCTAATATGAACATTCCAGGGCCCTTTGACACCCTTGAAAGGCTAAAATTCAGGTTCTCTAATGTTGGCCTCAACAATGATACTGATTTGGTTGCATTAAGT
GGTGCTCACACATTTGGACGAGCTCAATGTAGAACATTCATCGGCCGTTTATACAACTTCAACAACACTGGTCTTCCAGATCCAACACTGGACCCAACTTACCTGGAAACTCTTCGCCAG
ATATGTCCGCAGGGGGGAGATGGAAGAGTCCTAGCTAATCTTGATCCAACAACACCTGATACTTTTGACAAAAACTATTTCTCCAATCTTCAAGTTAACAAGGGCCTTCTTCAAAGTGAT
CAAGAACTATTTTCAACTCCTGGTGCTGACACCATTACCATTGTTAACAACTTTGGGAATAACCAAACTGCTTTCTTTGAAGCCTTTGTTGTTTCCATGATCAGAATGGGTAATCTCAGC
CCTCTGACAGGAACTGATGGTGAGATCAGGTTGAATTGCAGGGTTGTTAATGCACCTCCAGCTGAAGCAGATATTCTTCCTGTCAGCTCAATG

Retrieve as FASTA