Entry information : RcPrx12 (28691.m000035)
Entry ID 9343
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2012-01-04 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: RcPrx12 (28691.m000035)
Name (synonym) RcPrx12 (28691.m000035)
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx12
start..stop
S start..stop
PtPrx102 414 7e-147 1..271 72..343
PalPrx04 409 3e-145 1..271 66..337
MePrx57 409 8e-145 1..269 80..348
PkPrx04 405 2e-143 1..271 72..343
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20932..21123 192 N° 2 10733..10901 169 N° 3 9902..10353 452  
complement(join(9902..10353,10733..10901,20932..21123))


exon

Literature and cross-references RcPrx12 (28691.m000035)
DNA ref. Phytozome 12:   28691 (21123..9902)
Protein sequence: RcPrx12 (28691.m000035)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271
PWM (Da):   %s   29070.4  
PI (pH):   %s   4.3
Sequence
Send to BLAST
Send to Peroxiscan
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GCDGSLLLDNSATIESEKEALGNNNSARGFEVVDTMKSLLEAACPQTVSCADILTIASQESVTLTGGPSWTNLLGRRDSITANRTLANMNIPGPFDTLERLKFRFSNVGLNNDTDLVALSGAHTFGRAQCRTFIGRLYNFNNTGLPDPTLDPTYLETLRQICPQGGDGRVLANLDPTTPDTFDKNYFSNLQVNKGLLQSDQELFSTPGADTITIVNNFGNNQTAFFEAFVVSMIRMGNLSPLTGTDGEIRLNCRVVNAPPAEADILPVSS

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing which has not been found yet due to the NNNN in DNA).
DNA
Send to BLAST
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GGTTGTGATGGATCGCTTTTGTTGGACAATAGTGCTACTATAGAGAGTGAGAAAGAAGCTCTTGGCAACAACAACTCTGCCAGAGGTTTCGAAGTTGTGGACACCATGAAATCCCTGTTG
GAGGCTGCTTGTCCTCAAACTGTTTCTTGTGCTGATATTCTCACTATTGCATCTCAGGAATCTGTTACTTTG
GTAATCTTACTTTTCCTCTTCTTTCTACTTTTAACTTTTTTTTAGTAA
TTAACTATTAATCCAGCGCATATACGGTTTTGAAAACCCGATTATTCATATATTTAGATTTGATAAGAGTCTTTTTCATTTATATCTCACGTGTATATAGCAGTGAATAAAATTTAACCG
AATCGATCAGCTCGGTTTTTATTCTGAAAAGAATTAAAATAATTCGGTCTGATTTTATCAAAAATCTCAGTTAAATGGAAGCAAATAATTTTTTTTTTATTTTTATAGTAAAATTTAAAA
TTTTAAAGGACATTGTTTATATTATTTAGTTAATGTTTTGTAAATATAATTTTTTTATTGGATATTCCTCAAAACTATAAGTATGTTAATAAATTTTAATTTGATCTAAGAAATTCAAGT
AATTTAAAGAACTAAATCAAAACGAAATTATTTGATAAAATCTTGAAAAATTTCAAATTTTTAGTCTTTTCCAATTCAATTTAATAGACCGATCATTTGCTCACCTCTAATATTTTAAAT
AGCCAATCTTGTCTACCCCAATTTCTCTTATAACTAGCAAGTGAAAAGCTTTTTGAGTTCATTTATCTCATTTCTCTATTAGAAAATAGAGATTAAAGAATTATTAATTAATTATTTTTT
TATGACGAAACTAAATTTACAGGAAATTCTAGAACCATGCCCAATTAATTAGGCTGTCCAATAAAATAAAATAAAATAAAAATGACAAGTTACATTAGATAAGGTAAAGAAAAGAATATG
TTCATAGCCAAAGTATACAAGGTTTTAGTAGGTCACCATATCTATTATTAATATGCTTCCAATATGTCTCTTTCTTTTGTAAATTATATACTAATGCTTGTAATTTTATATAAATTTTCT
AGTTCTAGTGGTTGGACCGTTTGAGATCATTTTTTTGTCATATAGTTCATAAAAACCAGTAATTTACATTGTTTTTTGAAAATAATTTTAATAATTTAAAAGGAAATTTAAAAAGTAATT
TTACTTACCATAATGAGAAACAGGTTGTGGTTTAATAATTCAAAGTGTATTATTTTATTGACTAATAAGAAAAAGATTATGAAAACACTTTTCTGACTTTTAAGGTTGATTTTATCATGT
GCTTAACAAATATCATTGACAATAATTTTAATATTTTTAAGAATTGGAACGTGTAAGACACGAGAAACTATACATAAAACAACTACTTCACATAAAAAGACTATAAATTATAGCTTTTAA
CTGAAATGTGAAAGAGGGGTTTTCTTTTATATATATGCGATAATTACTAAATAAATTCTGAATTTTTAATTTTTAATTAATTTAATTTAATTATTTTAGAATTTAAATAATACTTATACT
TTTAATTTAATTTTAAAGCACTTTCAGTATGATTTTAAAATTTATATAAAAAATACATTATATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTAATGAAATA
AAAAATAAATAAAATTATAAATAACATAATTAGTTATATAAGAATTAAATTTAGTATTTTAAATCTTCTTATAATAGAATCTTTTATGGTTAATATGTTATCTATATAAATTAATAAAAA
TATATAGCTAATATCTTATTTTTAAAATAAGATAATTATTTAACTATAAATTAATATAATAATTATATTTATACAAAATATAATAAATACAGTGTCTTTTATCTTTTTTTTATATGAATA
CATAATAGTCCTATATTATATTAATAAAATATGTTAGACACGTACTAAAATATATCTTTTTTGCTAAATATAGAAAAAATAAGAGAAAAAAGAAAATAAAAAGAAAAATAAATAAATTTT
ATTTTTTATATTTTGATAAAAAGAGAAATATTTTTTTAAAAAAAAACTGATATTAGAAATATAAATTTTTATTTTTTATAAATTATTATAAAAATAAAATAATAATTTACGCTATTTATT
TTATTTTATTTCAGAAAAATATAATTTTTCGAGCCCATAAATTATCATATTTGCTTTATTTTTCTTATTATTCTTTTCTTCATTTTCAAACAAGTAATCCTTTCCCCCTCTTATACTCCT
CTTTGTTGTTCTTTATTTTTTTCAAAAATAGGTTTAAACTCCTTTTCTTTGTTAGGAATGGCTCAATTTGTTTATTTTATATAGACTTGAATTACTATCTTAATATTTAATGAATTAATG
AATTCAAAAGTTTGAATTTAAGTTCCTTAATAATCAAGGGTGTTTGGAAATCCATGTCATGTCATCTCCAGTTTGATCTTATCTTGTTTATTTTTCTAGGAACAATAAGAAAGAATAAAC
GGATTTCTTTTGATCCTTTCTTTCTGACAGGTTGCCGCATCAAATGGATTAAAGATAGTCTACACATTTATTTATTTATCTTTTTTTTTTTTTCATTTTCAAACTACAAAGAGTTAAAAT
TGTTTATAAGCTATTTGAAAAAATAAAATCTCATTTGAATTCGTTTAGTAAATAAATTAAATTTAAAAAATAAAAATATAATTTATTTAAATTAACTCTTAAACTAAATATCTAATAATA
ACCTTATAAAATTTATATATTTTACTTATAATAAGTATAAATTATTTATTTAAATTTATTAATTATAATAAAATCATAACTTTTATTAAATATATTGTTTTATTAATATATATTTTATAT
TTATAATTAATTAACAAATAATGTAATTTATAATTTATAATCTTTTTGCTTGTTTAGAGTCTTGAGATATGAAAGTAATTTAATATATTGAGTTCGAATTTAGTACAATAATAAACAAGT
CAATCCTAAATTAGTTAAAACTGACTAAAATTAACCGGATTCGATTTAATTATATTTATAAATACATCCGATCACTAATATTTAAATAGTGATTAAAGAAATTATATATATTAGAATTTT
ATTAATAAAACCTTTTCAACCGTAGTTGATATTTTCTTATAAATAATTTTGATAATTTCTTTAATAGACACTTACTTTCACAAGGTAGTGTTGTTAATTGTTTTTCTTTTCAATTACCAT
TGCAAGTTTTAGGAGAAAGATAAATTAATTAAAATAGAAAAATTTAAAATAACTCGAAAAAAAATGATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGTCAGGA
TTCTTCCCTTGATTTTTTATTTTATTTTACTTTATTTTTGAATTGTAGTGTTCTTTATTAATTGCAATCCTTCCAAATTCTTTTATGATGGAAGAAAACTTAAACAAGAAGACCAAATAA
GCAAACCACAAGACTAAATCAAGGCTATTTAACTTTTTGTAATTAAGTTATAATAATCTACAAGAAAGTCTATGTCCTTGCGGTTACATATTAATCCAAAAATTAAATATTTCAGTTTCT
ATAAAGCTCTCTTAAAGTAATTAAACTTGATTATGAATGAGTACTTCTTTTCTTTTGAAAAATATTATAAATGAGTACTTAGCAAGTATATTTAATTCTTCTTGATAAATATAATCTTTT
ATTTATATATAAAAGAAAAATATATCAATAAACCGTAAAATTATTTAAAATAAGAAGACTTATCAAAACATCTAGAAATCTATATATATATATATAATAAAAATGATGTTATGTAAGGAT
ATATTTTGATACCATTAATTATAAAAGGAATAATGTTCAATTTGGTTCTGCTTTTGTTACACGGATTTAATTTAATTTAATTTTATTTTAAATATGTGAATTTTTTAATTTAAATTTTTT
TATATTTAGTTCAAATTAATTCTATTTTTAAAAAAAAAAGTGGGAGTCATTCTCTCTTGAAAATAAAAATAAATAATAATCTATAATATTTTTTAAAAACTATTTTATACTTTTAGTACA
ATCAATATAATTAAGTAATAAATAGCTATTACCACTATTATTCTTGCTAAAAGTGCTCTCACATCTAACATCTTCAGTACCATCATTACTGTAATTGTCTTTTTCACTGTCATTATTAAG
AAAAAACAGTAAGGACATTGTAGGAATATTTGATCTTTTATTATATTTTATTTAAAATATTTGATCTTTTATTATATTTTATTTAAATATCAATGTATATTTTTTAATTTAAGTAATTTA
ATATAAGAAATTAATATTTTTTATTTTTTCATTATATTTACTCTCTTTTTAGAGAGTGTATAATTCACTCTCTTATTTTTTTTTTAAATAGAGCTAATTTGAGCTAAACATACAAAAATT
TGAATTAAAATGTCTATAAATTTAAAAGATTAAATACATTGAACCTGAATAATAAAGTTAATAGTCAAATTAGACTTTATTCCATCGTGTAAAAACAAAAAGAAAAAAGAACATTAGTAC
AATCATAACCTAGAAGACCAATTAGTTTGCCCCCACAATCTAACTTGGTGAACAAGAAGACACAATATATACATATATATATATATATATATATATATATAGGTACTATAGCTAAGATAT
CAAGCAAAGCACATGACTAAATCAAGGTTAATTGACTATTTGTGATCAAGTTAATTATGATAATGTAGAAGAAAGTCTATATGTTTGAAATCAAAGACAAGGAACTATAGGCATCCATAT
GGAATATATTCCATAATATATCAAAACTATAAGTTATAATCATCATGGAATTAATAATTAAATTCCAAGTACATTAATGTATTAGTTGACAAGCAACAGTTTTTGGAATATTAATACTGC
CCCCACCTACCTGCCTCCGGTTATCCTTGCACTAGTAACATACACCATCTAATTAAGCCTCCATGTTTTTAGCCGAAATTTAATTTTTTTTTAATATATATACTTAAGAAAATAATTTAT
TTTTATTGTTTAGTTATATATATATATATATATATATATATATATATATATATATATATAAGTATAAAATAAGAACGTACAAATTTATTAAAATGGCTTTATTGATTGTTTAATTAATTA
GATTGTTTATTAATTAATTTTGTCATAAAGAATATTGATAATTAATTAAATATAAGTCTAATTTTATTAAAATAAATAAATTAAAATTTATAATTAACTAATAGTTAAGAGAATTATAAA
TTTCACATATTAAATTTACGTGCACTATATGGAAAAAATTGGTATCTCTACATAATTCTTTTTTGTCATCAAAAAAACCTTATTTATGATTGCTAAACTTGTAGGATCGTTAGACTTTGA
GCGAAGATGATCCCTTCATTAAGGAGTTGTTTATTTTTCTTAATGTAAATATATATTTAGAGTTAATTTAAAATGTGCTGGATATGATTTTTACGGATAATAAATATTGCTTTAAGTGTT
TTAACATAAATACATATTAAGGTTCTAACTCAAACTCTAGTTAAGTTAAAAACTCTCACCTCTTACATTCTTTGATAAAAAAACTCTTTTTTTTAATAATAATTTTGGTCAATCTTATGT
TATTTTATGACAAACAGAAACATTGCTTGCACAAACAAGGAAAACACAAAGTCAAATTGCAGGACATGCTATCACATTTATTTTGTTTTAAATACTGAAAAGAAACCAAGAATTCAAATA
GTTAAAAAAAAAATAGAAAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAATCTCATTGAGGCTTCTTTTGGTATAGTTTTTCAGAGTAAAGATTATGATTTATTTTTTTAATTCTTTTAGTAATTTCGAAAATGATTTTTGAAAGAACTT
TCAAAAATTAAATTCAGAAAAATAAATTTTAAAAGATTTAAAATATAAAAAAAAAAGAATGAAAAGGCTAAGTTGGAAAATCATATCCAACTAACTAGGTTCAAATTAATTTCAAACTGT
ATATTTATTTACATTGTGCTTGCATGCTTTCTAAATGATTTTCCTGTTGAAAGAAAGTAAAAGTTTAATTCATTTATTTATTTCAGGGTTGTGATGGATCAATCTTATTGGATAAAACTG
ATACTATAGACACTGAGAAAGAGGCAATTGCCAACAACAATTCTGCAAGAGGTTTTGATGTTATTGATACAATGAAGGCCAGACTGGAGAGTATTTGTCCTGCTACTGTTTCCTGTGCTG
ATATTCTAACTATTGCAGCTCAAGAATCTGTTACTCTGGTAATATAGATTTTTTTACTTGCCTAATTAACCCTTTTAACCGAAATAACTATTCTGAAACTTGATAGAAATAATGGAATAG
TTATTATGATTATTATCTGCAGACAGGAGGTCCATCATGGACTAATTTACTTGGGAGAAGAGACAGCATAACAGCTAATAGAACTCTGGCTAATATGAACATTCCAGGGCCCTTTGACAC
CCTTGAAAGGCTAAAATTCAGGTTCTCTAATGTTGGCCTCAACAATGATACTGATTTGGTTGCATTAAGTG
GTAATTATTTATTATTTCTTCTCTATTCTCCAATAATTATGCTAAGAAA
TTTAAAAATAAAAAAAAATAAAAAGAATATATGATATATTGTTAACGACAATAATAGAGCAACACTTTTTGCTTGGTATAATTCCATGAAAATCATAAGATATGAAGTTATTGTCCTTCA
CTTCTGACTTTTGAGTTTTATAGGGGATGCTGTTCATATAATAATAATAGAAAGGAGTATGTTATAGTTCTCTATGTCTGATAATGTGTCTTCCAATCTTGTAAATATTTATTAGAATCA
TCAGATTAGTACTTATGTGGGAAAGGTACCCAACAGCTGAATTTAAATAAGGTATTTTAAAGATTTTTTGTAATTGTTTTTTTCTTGTAGGTGCTCACACATTTGGACGAGCTCAATGTA
GAACATTCATCGGCCGTTTATACAACTTCAACAACACTGGTCTTCCAGATCCAACACTGGACCCAACTTACCTGGAAACTCTTCGCCAGATATGTCCGCAGGGGGGAGATGGAAGAGTCC
TAGCTAATCTTGATCCAACAACACCTGATACTTTTGACAAAAACTATTTCTCCAATCTTCAAGTTAACAAGGGCCTTCTTCAAAGTGATCAAGAACTATTTTCAACTCCTGGTGCTGACA
CCATTACCATTGTTAACAACTTTGGGAATAACCAAACTGCTTTCTTTGAAGCCTTTGTTGTTTCCATGATCAGAATGGGTAATCTCAGCCCTCTGACAGGAACTGATGGTGAGATCAGGT
TGAATTGCAGGGTTGTTAATGCACCTCCAGCTGAAGCAGATATTCTTCCTGTCAGCTCAATG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTGTGATGGATCGCTTTTGTTGGACAATAGTGCTACTATAGAGAGTGAGAAAGAAGCTCTTGGCAACAACAACTCTGCCAGAGGTTTCGAAGTTGTGGACACCATGAAATCCCTGTTG
GAGGCTGCTTGTCCTCAAACTGTTTCTTGTGCTGATATTCTCACTATTGCATCTCAGGAATCTGTTACTTTG
ACAGGAGGTCCATCATGGACTAATTTACTTGGGAGAAGAGACAGCATA
ACAGCTAATAGAACTCTGGCTAATATGAACATTCCAGGGCCCTTTGACACCCTTGAAAGGCTAAAATTCAGGTTCTCTAATGTTGGCCTCAACAATGATACTGATTTGGTTGCATTAAGT
G
GTGCTCACACATTTGGACGAGCTCAATGTAGAACATTCATCGGCCGTTTATACAACTTCAACAACACTGGTCTTCCAGATCCAACACTGGACCCAACTTACCTGGAAACTCTTCGCCAG
ATATGTCCGCAGGGGGGAGATGGAAGAGTCCTAGCTAATCTTGATCCAACAACACCTGATACTTTTGACAAAAACTATTTCTCCAATCTTCAAGTTAACAAGGGCCTTCTTCAAAGTGAT
CAAGAACTATTTTCAACTCCTGGTGCTGACACCATTACCATTGTTAACAACTTTGGGAATAACCAAACTGCTTTCTTTGAAGCCTTTGTTGTTTCCATGATCAGAATGGGTAATCTCAGC
CCTCTGACAGGAACTGATGGTGAGATCAGGTTGAATTGCAGGGTTGTTAATGCACCTCCAGCTGAAGCAGATATTCTTCCTGTCAGCTCAATG

Retrieve as FASTA