Entry information : RcPrx[P]59 (30055.m001582)
Entry ID 9382
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2014-01-09 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2014-01-09 (Qiang Li)
Peroxidase information: RcPrx[P]59 (30055.m001582)
Name (synonym) RcPrx[P]59 (30055.m001582)
Class Class III peroxidase     [Orthogroup: Prx024]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx[P]59
start..stop
S start..stop
MePrx79 400 1e-141 1..274 3..323
PpePrx68 312 7e-107 1..277 1..328
CpapPrx17 311 1e-106 10..274 7..306
CclPrx109 307 3e-105 1..275 2..324
Literature and cross-references RcPrx[P]59 (30055.m001582)
DNA ref. Phytozome 12:   30055 (304616..305607)
Protein sequence: RcPrx[P]59 (30055.m001582)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   277 (250)
PWM (Da):   %s   30402.54 (27539.0) Transmb domain:   %s   i5-27o
PI (pH):   %s   7.93 (7.70) Peptide Signal:   %s   cut: 28 range:28-277
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MISRAVALTV TLFLVLISVN LTGQCYGQLQ FGYYKDRCLF DVESIVRGVV RAKFSTDKMT VAALLRLQFH DCFVHVCVRG YDVIDAAKSA VEFFCPRLVP CADIIAMATR DAVLFADGGW  YNVETGRRDG LVSSAKDVDL VGGHTVGAAH CSLFQNRLYD FKNGLPDSTM DRRLLILRDR CPQNSAGTNT TFLDQNPSSS FIVDNSFYQQ ILQLKGILQV DQELALNPIT KSVVKNIATG 
NDFSINFGRA MVKLGAVEVL TGNQGEIRRS CVTVNNP 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (short sequences in frame are missing).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATAAGTA GAGCAGTGGC ATTGACAGTG ACACTATTCC TTGTCCTTAT TTCTGTGAAC TTGACAGGCC AGTGCTATGG TCAACTGCAA TTTGGGTACT ATAAGGATAG GTGTTTGTTC  GATGTTGAGT CCATCGTGCG CGGTGTAGTT CGGGCAAAAT TCAGCACTGA CAAGATGACT GTCGCTGCTC TTCTTCGGTT GCAGTTCCAT GATTGTTTTG TTCATGTATG TAAGAGGCTA  TGATGTTATT GATGCTGCAA AATCTGCTGT GGAATTCTTC TGCCCGAGGC TTGTCCCTTG TGCTGATATT ATTGCAATGG CTACCAGAGA TGCTGTTCTC TTCGTAAGTT GCATCATTTT  GGAGGGTCAT GTGACCTCGA ACAGTGATTA TAATGTTTTA TCATACTTGC AGGCAGACGG AGGATGGTAC AATGTAGAAA CAGGAAGAAG AGATGGTTTG GTATCATCTG CTAAAGATGT  GGACCTGCAA TTTGTTAAGA AAGGACTTCT AGGTACTTCA AATTCTTCCT CTAGTAATAT TGGTTTCTCT TTTATCTATT TGTTTTTTCT TTGTAACATG TAGGTGGTCA CACAGTTGGT  GCAGCGCATT GCTCCCTCTT CCAAAACCGT CTATACGATT TCAAAAATGG CCTACCTGAT TCAACCATGG ATAGAAGATT ACTCGGATTC TAAGAGATAG GTGTCCTCAG AATTCAGCTG  GAACCAATAC AACATTTCTT GATCAGAACC CTTCTAGTTC TTTCATTGTA GATAATTCTT TCTACCAGCA AATACTACAG CTGAAAGGGA TCCTCCAAGT TGATCAAGAA CTGGCATTGA  ACCCCATTAC CAAATCCGTA GTGAAAAATA TAGCCACGGG TAATGATTTC TCAATCAACT TTGGTCGGGC CATGGTGAAG TTGGGAGCTG TAGAAGTCCT CACTGGCAAT CAAGGGGAAA 
TCAGGAGATC ATGTGTAACA GTAAACAATC CATAG 

Retrieve as FASTA