View Redoxidase 9388

Entry information : RcPrx66 (30147.m014005)

Entry ID	9388
Creation	2011-06-30 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: RcPrx66 (30147.m014005)

Name (synonym)

RcPrx66 (30147.m014005)

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus

Organism

Ricinus communis [TaxId: 3988 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	RcPrx66 start..stop	S start..stop
MePrx95	506	0	14..327	20..333
VvPrx25	478	1.13e-171	15..327	15..327
CsaPrx30	477	3.04e-171	1..327	15..332
NnPrx81	474	4.63e-170	2..327	5..331

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3928401..3929387	985
join(3928401..3929387)

Literature and cross-references RcPrx66 (30147.m014005)

DNA ref.	Phytozome 12: 30147 (3928401..3929387)

Protein sequence: RcPrx66 (30147.m014005)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	329 (309)
PWM (Da):	36444.43 (34215.2)	Transmb domain:	i12-34o
PI (pH):	8.54 (8.70)	Peptide Signal:	cut: 21 range:21-329

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAFPFPILLL LFLSIPISES KLSIDYYKTS CPGFQDIIRE TVTTKQSTNP TTAAATLRVF FHDCMVEGCD ASVLIASNAF NSAERDADLN HNLPGDAFDV VMRAKLALEV KCPKIVSCAD ILAQATRDLV LMVGGPFYPV RLGRKDGLIS KASHVAGNLP TTNMTMDQMI TYFRAKGFDV KEMVALMGAH TIGFSHCKEF ADRLYHYNKK TPTDPGLNPK YAAALKTFCS NYTKDPTMSA
FNDVLTPGKF DNMYFQNLPR GLGLLRSDNI LVKDPRTKPF VELYAANQSA FFADFAHVME KLSVYQIKTG RKGEVRSRCD QFNSITTKG

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCTTTCC CTTTTCCTAT TCTTCTCCTT CTCTTCCTCT CCATTCCTAT CTCTGAATCC AAGCTCTCTA TCGACTACTA CAAGACTTCA TGTCCTGGCT TTCAGGACAT CATTCGAGAA ACTGTCACCA CCAAACAAAG CACCAACCCT ACAACCGCAG CTGCAACACT ACGTGTGTTT TTCCATGACT GCATGGTGGA AGGGTGTGAC GCCTCAGTTC TTATTGCCTC CAATGCGTTC AATTCAGCTG AGCGTGATGC TGATCTCAAT CATAACCTCC CTGGAGACGC TTTCGATGTT GTTATGAGGG CTAAGCTTGC ACTCGAGGTT AAATGCCCCA AGATAGTTTC ATGTGCTGAT ATTCTGGCTC AAGCCACTCG AGACCTTGTC CTCATGGTTG GGGGGCCATT CTATCCCGTC CGTCTTGGCA GGAAAGATGG GCTCATCTCT AAAGCATCAC ACGTGGCCGG AAATCTTCCT ACAACTAACA TGACGATGGA TCAAATGATA ACCTATTTTA GAGCAAAAGG ATTCGATGTT AAAGAAATGG TTGCGTTGAT GGGTGCCCAT ACCATTGGAT TTTCTCATTG CAAGGAGTTT GCTGATAGGC TTTATCATTA CAACAAGAAG ACACCAACTG ATCCTGGACT CAACCCTAAG TATGCAGCTG CATTGAAGAC TTTTTGCTCT AATTATACCA AAGATCCAAC GATGTCTGCA TTCAATGATG TGCTTACACC AGGAAAGTTT GACAATATGT ACTTTCAGAA TTTGCCTAGA GGATTAGGGC TATTGAGGTC TGATAATATT CTTGTTAAAG ATCCTAGAAC TAAGCCTTTT GTGGAGCTTT ATGCAGCAAA TCAGTCGGCG TTCTTCGCGG ATTTCGCTCA TGTAATGGAG AAGCTCAGTG TTTATCAGAT CAAAACTGGG AGAAAAGGAG AGGTCAGGAG CAGGTGTGAT
CAGTTCAATT CTATTACAAC AAAGGGT

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA