Entry information : RcPrx66 (30147.m014005)
Entry ID 9388
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx66 (30147.m014005)
Name (synonym) RcPrx66 (30147.m014005)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx66
start..stop
S start..stop
MePrx95 506 0 14..327 20..333
VvPrx25 478 1e-171 15..327 15..327
CsaPrx30 477 3e-171 1..327 15..332
NnPrx81 474 4e-170 2..327 5..331
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3928401..3929387 987  
join(3928401..3929387)


exon

Literature and cross-references RcPrx66 (30147.m014005)
DNA ref. Phytozome 12:   30147 (3928401..3929387)
Protein sequence: RcPrx66 (30147.m014005)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (309)
PWM (Da):   %s   36444.43 (34215.2)  
PI (pH):   %s   8.54 (8.70) Peptide Signal:   %s   cut: 21 range:21-329
Sequence 0
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFPFPILLL LFLSIPISES KLSIDYYKTS CPGFQDIIRE TVTTKQSTNP TTAAATLRVF FHDCMVEGCD ASVLIASNAF NSAERDADLN HNLPGDAFDV VMRAKLALEV KCPKIVSCAD  ILAQATRDLV LMVGGPFYPV RLGRKDGLIS KASHVAGNLP TTNMTMDQMI TYFRAKGFDV KEMVALMGAH TIGFSHCKEF ADRLYHYNKK TPTDPGLNPK YAAALKTFCS NYTKDPTMSA 
FNDVLTPGKF DNMYFQNLPR GLGLLRSDNI LVKDPRTKPF VELYAANQSA FFADFAHVME KLSVYQIKTG RKGEVRSRCD QFNSITTKG 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCC CTTTTCCTAT TCTTCTCCTT CTCTTCCTCT CCATTCCTAT CTCTGAATCC AAGCTCTCTA TCGACTACTA CAAGACTTCA TGTCCTGGCT TTCAGGACAT CATTCGAGAA  ACTGTCACCA CCAAACAAAG CACCAACCCT ACAACCGCAG CTGCAACACT ACGTGTGTTT TTCCATGACT GCATGGTGGA AGGGTGTGAC GCCTCAGTTC TTATTGCCTC CAATGCGTTC  AATTCAGCTG AGCGTGATGC TGATCTCAAT CATAACCTCC CTGGAGACGC TTTCGATGTT GTTATGAGGG CTAAGCTTGC ACTCGAGGTT AAATGCCCCA AGATAGTTTC ATGTGCTGAT  ATTCTGGCTC AAGCCACTCG AGACCTTGTC CTCATGGTTG GGGGGCCATT CTATCCCGTC CGTCTTGGCA GGAAAGATGG GCTCATCTCT AAAGCATCAC ACGTGGCCGG AAATCTTCCT  ACAACTAACA TGACGATGGA TCAAATGATA ACCTATTTTA GAGCAAAAGG ATTCGATGTT AAAGAAATGG TTGCGTTGAT GGGTGCCCAT ACCATTGGAT TTTCTCATTG CAAGGAGTTT  GCTGATAGGC TTTATCATTA CAACAAGAAG ACACCAACTG ATCCTGGACT CAACCCTAAG TATGCAGCTG CATTGAAGAC TTTTTGCTCT AATTATACCA AAGATCCAAC GATGTCTGCA  TTCAATGATG TGCTTACACC AGGAAAGTTT GACAATATGT ACTTTCAGAA TTTGCCTAGA GGATTAGGGC TATTGAGGTC TGATAATATT CTTGTTAAAG ATCCTAGAAC TAAGCCTTTT  GTGGAGCTTT ATGCAGCAAA TCAGTCGGCG TTCTTCGCGG ATTTCGCTCA TGTAATGGAG AAGCTCAGTG TTTATCAGAT CAAAACTGGG AGAAAAGGAG AGGTCAGGAG CAGGTGTGAT 
CAGTTCAATT CTATTACAAC AAAGGGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCC CTTTTCCTAT TCTTCTCCTT CTCTTCCTCT CCATTCCTAT CTCTGAATCC AAGCTCTCTA TCGACTACTA CAAGACTTCA TGTCCTGGCT TTCAGGACAT CATTCGAGAA  ACTGTCACCA CCAAACAAAG CACCAACCCT ACAACCGCAG CTGCAACACT ACGTGTGTTT TTCCATGACT GCATGGTGGA AGGGTGTGAC GCCTCAGTTC TTATTGCCTC CAATGCGTTC  AATTCAGCTG AGCGTGATGC TGATCTCAAT CATAACCTCC CTGGAGACGC TTTCGATGTT GTTATGAGGG CTAAGCTTGC ACTCGAGGTT AAATGCCCCA AGATAGTTTC ATGTGCTGAT  ATTCTGGCTC AAGCCACTCG AGACCTTGTC CTCATGGTTG GGGGGCCATT CTATCCCGTC CGTCTTGGCA GGAAAGATGG GCTCATCTCT AAAGCATCAC ACGTGGCCGG AAATCTTCCT  ACAACTAACA TGACGATGGA TCAAATGATA ACCTATTTTA GAGCAAAAGG ATTCGATGTT AAAGAAATGG TTGCGTTGAT GGGTGCCCAT ACCATTGGAT TTTCTCATTG CAAGGAGTTT  GCTGATAGGC TTTATCATTA CAACAAGAAG ACACCAACTG ATCCTGGACT CAACCCTAAG TATGCAGCTG CATTGAAGAC TTTTTGCTCT AATTATACCA AAGATCCAAC GATGTCTGCA  TTCAATGATG TGCTTACACC AGGAAAGTTT GACAATATGT ACTTTCAGAA TTTGCCTAGA GGATTAGGGC TATTGAGGTC TGATAATATT CTTGTTAAAG ATCCTAGAAC TAAGCCTTTT  GTGGAGCTTT ATGCAGCAAA TCAGTCGGCG TTCTTCGCGG ATTTCGCTCA TGTAATGGAG AAGCTCAGTG TTTATCAGAT CAAAACTGGG AGAAAAGGAG AGGTCAGGAG CAGGTGTGAT 
CAGTTCAATT CTATTACAAC AAAGGGT 

Retrieve as FASTA