Entry information : RcPrx[P]69 (30156.m001759)
Entry ID 9391
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2014-01-09 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2014-01-09 (Qiang Li)
Peroxidase information: RcPrx[P]69 (30156.m001759)
Name (synonym) RcPrx[P]69 (30156.m001759)
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx[P]69
start..stop
S start..stop
RcPrx70 601 0 1..319 1..327
MePrx93 496 8e-179 5..319 4..328
PtPrx25 483 1e-173 3..319 2..324
MePrx24 472 3e-169 3..319 2..325
Literature and cross-references RcPrx[P]69 (30156.m001759)
DNA ref. Phytozome 12:   30156 (1476329..1474866)
Protein sequence: RcPrx[P]69 (30156.m001759)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (293)
PWM (Da):   %s   34577.51 (32040.1) Transmb domain:   %s   i5-22o
PI (pH):   %s   8.15 (8.15) Peptide Signal:   %s   cut: 25 range:25-317
Sequence 0
Send to BLAST
Send to Peroxiscan
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MRGNIGYLGL IIFGLLAFIS STEAQLQMNF YAKSCPKAEK IVSDFVNEHI HNAPSLTASF IRMHFHDCFV QGCDASVLLN SSSMAGEQPK KAAAPNRSLR GFDFIDRVKS LLEDECPGVV  SCADIITLVT RDSIVATGGP SWQVPTGIRD GVISRSSEAT AIPAPFANIT TLQTLFANQG LDLKDLVIIS GAHTIGMAHC STISDRLYNF KSR**ICYNL KARKCRSPDD TTTKIEMDPG 
SRKTFDLSYY SLLLKRRGLF ESDAALTTNS VSLSFINQIL KGSLQDFFAE YANSMEKMGR INVKTGSDGE IRKHCAVVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. No prediction from phytozome: frame shifts, gaps in frame and stop in frame.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAGGGA ATATTGGGTA TTTGGGTCTG ATCATCTTTG GTCTTTTAGC ATTTATAAGC TCAACTGAAG CTCAACTGCA GATGAACTTT TATGCTAAAA GCTGCCCAAA AGCGGAGAAG  ATTGTTTCTG ACTTTGTCAA TGAGCACATC CACAATGCTC CTTCTTTGAC AGCATCCTTC ATAAGAATGC ACTTCCATGA TTGTTTTGTC AGGGTTTGTC TACTAATTCT TCAATTCAAC  TTATTTCGTT CTCTCTCTGT CTCTTTCTTG CTTAACAGTA ACTGGAGTGT TGCAATGTAT ATATTGTGCG TCAGGGCTGT GATGCATCTG TGCTTCTGAA CTCATCGTCG ATGGCGGCGA  ACAACCCAAA AAGGCTGCTG CTCCAAATCG ATCGCTAAGA GGCTTCGACT TCATTGATAG AGTGAAGAGC TTGCTTGAAG ATGAATGTCC AGGCGTTGTT TCTTGTGCAG ATATTATTAC  TCTGGTCACT AGGGACTCCA TAGTCGCCAC AGTATGTGAT TCAATATATT TATATATAAT ATTCTTGAGA AATAAGACTT GCATTAGCAA GAGCTAAGCT TGCTCAACAG CAGAAACATT  ACTTCGTTCA ACAGGAATTT TTGTCTTTAT ATTACATTTG TAGGACCAAA GCAATGGAGC AAAGTATAGG TCCTATAACA GTAACCATTA GTGCATGTTT TCAAGATTTC TATATATATA  ATAATTATAT TTTCTTCTTA ATTCCTTTTA TGTGGATAGG GAGGTCCATC CTGGCAAGTT CCAACTGGTA TAAGAGATGG AGTAATATCA AGATCCTCAG AGGCCACAGC CATCCCAGCT  CCCTTTGCCA ACATCACCAC TCTCCAAACA CTGTTTGCCA ACCAAGGACT TGATCTGAAA GACCTTGTCT TGCTCTCGGG TAATTACTGA ACATACTCAT CACATCCTTA CATTTTTCTT  TTTCTAACGA AACATGTAAA CCTACTGTAG TATGTATTAA GAATAAGCAA ATGTCATATA TTTTTATATG GAATCACTGC CTGACGCATA AACCTGGTTG GCTGAATTAT TTCAGGGGCA  CACACAATTG GGATGGCCCA CTGCTCAACA ATTTCGGACA GATTGTATAA CTTCAAATCT AGATAGTGAA TATGCTACAA TCTCAAGGCA AGGAAGTGCA GGAGTCCTGA TGACACTACT  ACTAAGATTG AGATGGATCC TGGGAGTCGC AAGACATTTG ACCTTAGTTA TTACTCACTT CTACTTAAAA GAAGGGGTCT CTTTGAATCT GATGCTGCCT TGACCACAAA TTCTGTTAGC  CTGTCTTTTA TTAACCAGAT CCTCAAGGGT TCACTACAAG ATTTCTTTGC AGAATATGCC AACTCCATGG AGAAAATGGG TAGGATCAAT GTTAAAACTG GGTCTGATGG TGAGATTAGG 
AAGCATTGTG CAGTGGTTAA TTAA 

Retrieve as FASTA