Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
112 |
PWM (Da): |
12510.31 |
|
PI (pH):
| 4.37 |
|
Sequence 183
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MKLLRDYDAFILLDSVDGRKSEKDFTEDCDIVHLFKSQVEEVCPRIVSCEDFIFLAARKYTLQVGGSFYPLFSDEPPSPPADLSIRGDDERETLSLSFLSFGVAKLGFIKA |
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (5' end is missing due to NNNN in DNA, gaps in frame, 3' end is missing). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGCTTTTGCGGGATTATGATGCTTTTATTCTGTTAGATTCTGTTGATGGCAGGAAATCTGAGAAAGATTTCACTGAGGATTGTGATATAGTTCACTTATTCAAGTCTCAGGTTGAA GAAGTTTGCCCTCGAATTGTTTCTTGTGAAGATTTTATTTTCTTGGCAGCCAGAAAATATACTCTTCAGGTATGTATCTCCATACCCACCTCTCTCTCTTTCTCGGGATCTTATTGCATT TGTGAATTTCAGGTTGGTGGTTCATTCTATCCACTCTTCTCAGATGAGCCTCCTTCCCCCCCTGCTGATCTTTCAATAAGAGGCGACGATGAAAGAGAAACTTTGTCTCTTAGGTACTAT TCTTGGCCTTTATCTTTGTGTGTGTGTGTGTGTTTTTTTTTTTAAATTTGGTAAAACTATGTTGATTGAGCCTTGTCATTCACCTTTAAGTATTTTTGCGGTTCGGTCTCTTATTAAACA TCCTTTAAATTCTTGTTATCAGAGCTTCCTTATCAAGATGAAGCTTTCTGTCCTTCGGGGTGGCAAAGCTCGGATTCATCAAAGCTGGG |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGCTTTTGCGGGATTATGATGCTTTTATTCTGTTAGATTCTGTTGATGGCAGGAAATCTGAGAAAGATTTCACTGAGGATTGTGATATAGTTCACTTATTCAAGTCTCAGGTTGAA GAAGTTTGCCCTCGAATTGTTTCTTGTGAAGATTTTATTTTCTTGGCAGCCAGAAAATATACTCTTCAGGTTGGTGGTTCATTCTATCCACTCTTCTCAGATGAGCCTCCTTCCCCCCCT GCTGATCTTTCAATAAGAGGCGACGATGAAAGAGAAACTTTGTCTCTTAGCTTTCTGTCCTTCGGGGTGGCAAAGCTCGGATTCATCAAAGCTGGG |
Retrieve as FASTA
|
|