Entry information : VvPrx92 (GSVIVT01012935001)
Entry ID 9423
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang Li)
Peroxidase information: VvPrx92 (GSVIVT01012935001)
Name (synonym) VvPrx92 (GSVIVT01012935001)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx92
start..stop
S start..stop
VvPrx[P]74 150 8e-50 3..79 1..77
VvPrx[P]73 148 3e-49 1..79 1..80
VvPrx[P]70 143 3e-47 3..79 1..77
VvPrx[P]100 131 2e-42 3..79 1..77
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13829243..13829482 240  
join(13829243..13829482)


exon

Literature and cross-references VvPrx92 (GSVIVT01012935001)
DNA ref. Phytozome 12:   chr17 (13829243..13829482)
Protein sequence: VvPrx92 (GSVIVT01012935001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   79
PWM (Da):   %s   8645.14  
PI (pH):   %s   5.36
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MREIISTKEI NDPTTATTTF RLFFHDCMVE GYDTSVLISS NSFNTAQHDA DINLSLPGNT VSIHPNCTSL ASPVISHHS* 

Retrieve as FASTA  
Remarks Short PS from genomic. Incorrect prediction from phytozome (Long 5' end is missing).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGAGA TCATAAGCAC CAAGGAAATA AACGACCCCA CCACAGCTAC TACCACTTTC CGCCTCTTCT TCCATGACTG CATGGTTGAA GGCTACGACA CCTCAGTCCT CATCTCCTCT  AACTCCTTCA ACACTGCCCA GCATGACGCC GACATTAACC TCTCCCTCCC AGGCAATACT GTATCAATAC ATCCAAATTG TACGAGTCTT GCCTCTCCAG TCATCAGTCA TCATTCATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGAGA TCATAAGCAC CAAGGAAATA AACGACCCCA CCACAGCTAC TACCACTTTC CGCCTCTTCT TCCATGACTG CATGGTTGAA GGCTACGACA CCTCAGTCCT CATCTCCTCT  AACTCCTTCA ACACTGCCCA GCATGACGCC GACATTAACC TCTCCCTCCC AGGCAATACT GTATCAATAC ATCCAAATTG TACGAGTCTT GCCTCTCCAG TCATCAGTCA TCATTCATGA 

Retrieve as FASTA