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Entry information : SiPrx04 (Si001960m)
Entry ID 9438
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-12 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx04 (Si001960m)
Name (synonym) SiPrx04 (Si001960m)
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx04
start..stop		 S start..stop
SiPrx07 441 8.51e-156 34..362 35..356
SbPrx69 439 3.85e-155 19..355 18..352
OsPrx23 438 7.85e-155 9..362 4..358
TaPrx77-1B 438 1.18e-154 32..353 39..356
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9438' 'join(46891912..46892166,46892255..46892443,46892558..46893202)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46891912..46892166 253 N° 2 46892255..46892443 187 N° 3 46892558..46893202 643  
join(46891912..46892166,46892255..46892443,46892558..46893202)


exon

Literature and cross-references SiPrx04 (Si001960m)
DNA ref. Phytozome 12:   scaffold_5 (46891912..46893202)
Protein sequence: SiPrx04 (Si001960m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362 (336)
PWM (Da):   %s   39040.05 (36686.8) Transmb domain:   %s   i9-31o
PI (pH):   %s   8.83 (8.59) Peptide Signal:   %s   cut: 27 range:27-362
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARAGTSRAAAAVALVVAVLCASAAAEAGITRPPPVARGLSFNFY
KKTCPNAEALVRGFVHDAIQRDVGLAAGLLRLHFHDCFVQGCDASLLLDDEHGEQKALPNLTLRREAITAINDIRDRLDKACGGPVVSCADILTLAARDAVVERGGPRYKVPLGRRDNVNFASHDEVNKGLPSPDANVGAMLEVLRKGNLGLDATDLVAL
SGAHTIGLSHCTSFENRLFPRQDSTMDAAFAAQLKQTCPAKGVSRTTPLDVRTSDVFDKMYFVNLVNRQGLLTSDQDLFTEARTRPAVQRFARSQNAFFRQFRVSMVKMGQIKVLTGDQG
QVRRNCSATNNLMRTTSTAAGLPWWFVVPEAETSLVF*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCGTGCAGGTACTAGTAGGGCCGCCGCCGCAGTGGCTCTAGTGGTTGCCGTCCTCTGCGCCTCTGCCGCGGCGGAGGCCGGGATCACCAGGCCGCCGCCGGTGGCGCGTGGCCTG
TCGTTCAACTTCTACAAGAAGACCTGCCCCAACGCGGAGGCCTTGGTGCGGGGGTTCGTGCACGACGCCATCCAGCGGGACGTGGGCCTCGCCGCGGGGCTCCTCCGCCTCCATTTCCAC
GACTGCTTCGTCCAGAGGTAGATGGAGCTTCATTCTTTGGATCACTCCAACAGCAGGGCGTAACCGTGTCGGATCGATGAACTCGACGTGCGTATGCATGCGCAGGGGTGCGACGCGTCC
CTGCTGCTGGACGACGAGCACGGCGAACAGAAGGCCCTCCCCAACCTGACGCTCCGCCGGGAGGCGATCACGGCCATCAACGACATCCGTGACCGCCTCGACAAGGCCTGCGGCGGCCCC
GTCGTGTCCTGCGCCGACATCCTCACGCTCGCTGCCCGCGACGCCGTCGTCGAGAGGTACGCGCTCCGATCCGATCCTTGGCGGGCACGTCGTCGTCCCTCTGCTCCGGTTGCCAGCAGC
CAGAAGAACCTGAACTCACCATGCGCTGCTCCTTGTTACATATGCTGCAGAGGGGAGGGCCGAGGTACAAGGTGCCCCTGGGGCGTCGCGACAACGTCAACTTCGCGTCGCATGATGAAG
TCAACAAGGGGCTCCCGAGCCCTGATGCCAACGTCGGCGCGATGCTGGAGGTGCTGCGCAAGGGCAACCTCGGCCTCGACGCCACCGACCTGGTGGCGCTCTCCGGCGCGCACACCATCG
GCCTCAGCCACTGCACCTCCTTCGAGAACCGCCTCTTCCCGCGGCAGGACTCCACCATGGACGCCGCCTTCGCCGCCCAGCTGAAGCAGACCTGCCCGGCCAAGGGCGTCAGCAGGACGA
CGCCGCTCGACGTCCGCACGTCCGACGTCTTCGACAAGATGTATTTCGTCAACCTGGTCAACCGGCAGGGGCTCCTCACCTCCGACCAGGACCTCTTCACCGAGGCCAGGACCAGGCCCG
CCGTCCAACGGTTCGCGCGGAGCCAGAATGCCTTCTTCCGCCAGTTCAGGGTCTCCATGGTCAAGATGGGGCAGATCAAGGTGCTCACCGGCGACCAGGGCCAGGTCCGACGCAACTGCT
CGGCGACCAACAACCTGATGCGCACCACCAGTACCGCCGCCGGCCTGCCGTGGTGGTTCGTCGTCCCCGAGGCAGAGACGAGCCTCGTGTTCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCGTGCAGGTACTAGTAGGGCCGCCGCCGCAGTGGCTCTAGTGGTTGCCGTCCTCTGCGCCTCTGCCGCGGCGGAGGCCGGGATCACCAGGCCGCCGCCGGTGGCGCGTGGCCTG
TCGTTCAACTTCTACAAGAAGACCTGCCCCAACGCGGAGGCCTTGGTGCGGGGGTTCGTGCACGACGCCATCCAGCGGGACGTGGGCCTCGCCGCGGGGCTCCTCCGCCTCCATTTCCAC
GACTGCTTCGTCCAGGGGTGCGACGCGTCCCTGCTGCTGGACGACGAGCACGGCGAACAGAAGGCCCTCCCCAACCTGACGCTCCGCCGGGAGGCGATCACGGCCATCAACGACATCCGT
GACCGCCTCGACAAGGCCTGCGGCGGCCCCGTCGTGTCCTGCGCCGACATCCTCACGCTCGCTGCCCGCGACGCCGTCGTCGAGAGGGGAGGGCCGAGGTACAAGGTGCCCCTGGGGCGT
CGCGACAACGTCAACTTCGCGTCGCATGATGAAGTCAACAAGGGGCTCCCGAGCCCTGATGCCAACGTCGGCGCGATGCTGGAGGTGCTGCGCAAGGGCAACCTCGGCCTCGACGCCACC
GACCTGGTGGCGCTCTCCGGCGCGCACACCATCGGCCTCAGCCACTGCACCTCCTTCGAGAACCGCCTCTTCCCGCGGCAGGACTCCACCATGGACGCCGCCTTCGCCGCCCAGCTGAAG
CAGACCTGCCCGGCCAAGGGCGTCAGCAGGACGACGCCGCTCGACGTCCGCACGTCCGACGTCTTCGACAAGATGTATTTCGTCAACCTGGTCAACCGGCAGGGGCTCCTCACCTCCGAC
CAGGACCTCTTCACCGAGGCCAGGACCAGGCCCGCCGTCCAACGGTTCGCGCGGAGCCAGAATGCCTTCTTCCGCCAGTTCAGGGTCTCCATGGTCAAGATGGGGCAGATCAAGGTGCTC
ACCGGCGACCAGGGCCAGGTCCGACGCAACTGCTCGGCGACCAACAACCTGATGCGCACCACCAGTACCGCCGCCGGCCTGCCGTGGTGGTTCGTCGTCCCCGAGGCAGAGACGAGCCTC
GTGTTCTAG

Retrieve as FASTA