Entry information : SiPrx06 (Si002007m)
Entry ID 9440
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx06 (Si002007m)
Name (synonym) SiPrx06 (Si002007m)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx06
start..stop
S start..stop
ZmPrx16 563 0 29..357 29..361
SbPrx68 518 0 28..357 42..377
OsPrx20 481 2e-171 31..357 34..365
TaPrx23 474 5e-169 6..357 2..357
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46852637..46853710 1074  
join(46852637..46853710)


exon

Literature and cross-references SiPrx06 (Si002007m)
DNA ref. Phytozome 12:   scaffold_5 (46852637..46853710)
Protein sequence: SiPrx06 (Si002007m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358 (329)
PWM (Da):   %s   38121.67 (35465.2) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (6.50) Peptide Signal:   %s   cut: 29 range:29-357
Sequence
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Send to Peroxiscan
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MAGSTAGPAA LLPLVAVIAL LMTAPAAAAR YPPLAPGLSF DFYKKSCPKA ESIVRDYLTS AIRSNVGLAA ALIRLHFHDC FVQGCDASIL LDSTPTQKSE RDAFPNQTLR PAAFKAVNDI  RDRLEKACGR VVSCADIVTL AARDSVVLGG GPAYKVPLGR RDGLAPASED AILGALPPPT SKVPTLVSFL AKINLDVTDL VALSGGHTVG IAHCGSFEKR LFPTQDPTLN QWFAGQLRLT 
CPVEGATNTT VNDIRTPNTF DNKYYVDLLN REGLFTSDQD LLSNTTTRPI VTKFAVDQDA FFEQFVYSYV KMGQINVLTG SSQGQIRANC SVRNAAAGND DLLPWSVVET AAETLVL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGGA GCACGGCAGG CCCTGCTGCT CTGCTGCCAC TTGTGGCCGT GATCGCTTTG CTGATGACTG CTCCGGCGGC GGCGGCTAGG TACCCGCCGC TGGCGCCGGG GCTGTCGTTC  GACTTCTACA AGAAGAGCTG CCCCAAGGCG GAGTCCATCG TCAGGGACTA CCTCACCTCC GCCATCAGGA GCAACGTGGG CCTCGCCGCC GCGCTCATCC GGCTCCACTT CCACGACTGC  TTCGTCCAGG GCTGCGACGC CTCCATCCTG CTCGACTCCA CGCCCACCCA GAAGAGCGAG CGGGACGCGT TCCCCAACCA GACGCTCCGC CCGGCGGCGT TCAAGGCCGT CAACGACATC  CGCGACCGCC TCGAGAAGGC CTGCGGCCGC GTCGTCTCCT GCGCCGACAT CGTCACCCTC GCCGCCCGCG ACTCCGTGGT CCTGGGTGGC GGCCCGGCGT ACAAGGTGCC CCTGGGCCGG  CGCGACGGCC TGGCACCGGC GTCGGAGGAC GCCATCCTCG GCGCGCTACC GCCGCCGACG TCCAAGGTGC CGACGCTGGT GTCGTTCCTG GCCAAGATCA ACCTGGACGT GACCGACCTC  GTGGCGCTCT CCGGCGGGCA CACCGTCGGC ATCGCCCACT GCGGGTCCTT CGAGAAGCGG CTGTTCCCGA CGCAGGACCC CACCCTCAAC CAGTGGTTCG CCGGCCAGCT GCGGCTCACC  TGCCCCGTCG AGGGCGCCAC CAACACCACC GTCAACGACA TCCGGACCCC CAACACCTTT GACAACAAGT ACTACGTGGA CCTGCTGAAC AGGGAGGGGC TCTTCACCTC CGACCAGGAC  CTGCTCAGCA ACACCACCAC CAGGCCCATC GTCACCAAGT TCGCCGTCGA CCAGGACGCC TTCTTCGAGC AGTTCGTCTA CTCCTACGTC AAGATGGGGC AGATCAACGT GCTCACGGGG 
TCCTCGCAGG GACAGATCCG CGCCAACTGC TCCGTGCGCA ACGCCGCCGC CGGCAACGAC GACCTGCTGC CGTGGTCCGT CGTCGAGACC GCTGCCGAGA CCCTCGTGCT CTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGGA GCACGGCAGG CCCTGCTGCT CTGCTGCCAC TTGTGGCCGT GATCGCTTTG CTGATGACTG CTCCGGCGGC GGCGGCTAGG TACCCGCCGC TGGCGCCGGG GCTGTCGTTC  GACTTCTACA AGAAGAGCTG CCCCAAGGCG GAGTCCATCG TCAGGGACTA CCTCACCTCC GCCATCAGGA GCAACGTGGG CCTCGCCGCC GCGCTCATCC GGCTCCACTT CCACGACTGC  TTCGTCCAGG GCTGCGACGC CTCCATCCTG CTCGACTCCA CGCCCACCCA GAAGAGCGAG CGGGACGCGT TCCCCAACCA GACGCTCCGC CCGGCGGCGT TCAAGGCCGT CAACGACATC  CGCGACCGCC TCGAGAAGGC CTGCGGCCGC GTCGTCTCCT GCGCCGACAT CGTCACCCTC GCCGCCCGCG ACTCCGTGGT CCTGGGTGGC GGCCCGGCGT ACAAGGTGCC CCTGGGCCGG  CGCGACGGCC TGGCACCGGC GTCGGAGGAC GCCATCCTCG GCGCGCTACC GCCGCCGACG TCCAAGGTGC CGACGCTGGT GTCGTTCCTG GCCAAGATCA ACCTGGACGT GACCGACCTC  GTGGCGCTCT CCGGCGGGCA CACCGTCGGC ATCGCCCACT GCGGGTCCTT CGAGAAGCGG CTGTTCCCGA CGCAGGACCC CACCCTCAAC CAGTGGTTCG CCGGCCAGCT GCGGCTCACC  TGCCCCGTCG AGGGCGCCAC CAACACCACC GTCAACGACA TCCGGACCCC CAACACCTTT GACAACAAGT ACTACGTGGA CCTGCTGAAC AGGGAGGGGC TCTTCACCTC CGACCAGGAC  CTGCTCAGCA ACACCACCAC CAGGCCCATC GTCACCAAGT TCGCCGTCGA CCAGGACGCC TTCTTCGAGC AGTTCGTCTA CTCCTACGTC AAGATGGGGC AGATCAACGT GCTCACGGGG 
TCCTCGCAGG GACAGATCCG CGCCAACTGC TCCGTGCGCA ACGCCGCCGC CGGCAACGAC GACCTGCTGC CGTGGTCCGT CGTCGAGACC GCTGCCGAGA CCCTCGTGCT CTAG 

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