Entry information : SiPrx104 (Si024554m)
Entry ID 9448
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx104 (Si024554m)
Name (synonym) SiPrx104 (Si024554m)
Class Class III peroxidase    [Orthogroup: Prx141]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx104
start..stop
S start..stop
SbPrx111 503 0 1..323 1..323
SiPrx99 499 3e-180 1..323 1..321
SbPrx109 498 2e-179 1..323 1..323
ZmPrx129 466 4e-167 1..323 1..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3350463..3350681 219 N° 2 3350820..3351572 753  
join(3350463..3350681,3350820..3351572)


exon

Literature and cross-references SiPrx104 (Si024554m)
DNA ref. Phytozome 12:   scaffold_3 (3350463..3351572)
Protein sequence: SiPrx104 (Si024554m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (297)
PWM (Da):   %s   33715.78 (31136.5) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.63 (7.68) Peptide Signal:   %s   cut: 27 range:27-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAISACQALLLMALAAAALMMSTASGTLQYNFYSSSCPKAEEAVRNATVKIISNNPTMGAAIVRLFFHDCFVKGCDASILLDQSSSNPQPEKLAIPLRGYDAVNTIKAAVEAVCPGVVSCADILAFAARDSAMVSGGFTFPMLGGRRDGLASDLRDIFGSIPAPNMQVQQLVGSFSAKGLSAGDLVALSGAHSFGITHCSFVTPRLYPAVDPTLNATYAAALRKVCPQSSGGGTVLNNNNITDPNVLSNQYYKNLGTREVLFKSDQTLTSDAATAKMVQDNADNPVAWMARFAGAMVRMGGIEVLTGNQGEIRKVCGATNSGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATCTCAGCATGCCAGGCCTTGCTGCTCATGGCGTTGGCCGCCGCTGCGCTGATGATGAGCACGGCGTCCGGGACATTGCAGTACAACTTCTACAGCTCGTCGTGCCCCAAAGCC
GAGGAGGCGGTGCGCAACGCCACCGTGAAGATCATCTCCAACAACCCCACCATGGGCGCCGCCATCGTGCGCCTCTTCTTCCACGACTGCTTTGTCAAG
GTGATTATTNNNNNNNNNNNN
NNNNNNNNNNNNGATCATCTTTATGCCACAGCCATACTATTGTATTTCCTGTCTTATGATCGATCGGTGTCGTTTCAAGTTCAAATATACAATTAAACAACTTCATGTGATTTCCAGGGT
TGCGACGCTTCCATTCTGCTGGACCAGTCGAGCAGCAACCCGCAGCCGGAGAAGCTGGCCATCCCGCTGCGCGGCTACGACGCCGTGAACACCATCAAAGCTGCCGTGGAGGCCGTCTGC
CCCGGCGTGGTCTCCTGCGCCGACATCCTAGCCTTCGCGGCGCGCGACTCCGCCATGGTCTCCGGCGGCTTCACCTTCCCCATGCTGGGCGGCCGCCGCGACGGGCTCGCCTCCGACCTG
CGCGACATCTTCGGGAGCATCCCGGCCCCGAACATGCAGGTCCAGCAGCTCGTCGGCAGCTTCTCCGCCAAGGGCCTGAGCGCCGGCGACCTGGTGGCGCTCTCCGGCGCGCACTCCTTC
GGCATCACCCACTGCTCCTTCGTCACTCCCCGGCTGTACCCCGCCGTCGACCCGACCCTGAACGCCACCTACGCCGCCGCGCTGAGGAAGGTGTGCCCGCAGAGCAGCGGCGGCGGCACG
GTGCTCAACAACAACAACATCACGGACCCCAACGTGCTGAGCAACCAGTACTACAAGAACCTGGGCACCAGGGAGGTGCTCTTCAAGTCGGACCAGACGCTGACGAGCGACGCCGCCACG
GCGAAAATGGTGCAGGACAACGCCGACAACCCGGTCGCGTGGATGGCGAGGTTCGCCGGAGCGATGGTGAGGATGGGCGGCATCGAGGTGCTCACCGGGAACCAGGGTGAGATCAGGAAG
GTGTGCGGCGCCACCAACAGTGGCAGCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATCTCAGCATGCCAGGCCTTGCTGCTCATGGCGTTGGCCGCCGCTGCGCTGATGATGAGCACGGCGTCCGGGACATTGCAGTACAACTTCTACAGCTCGTCGTGCCCCAAAGCC
GAGGAGGCGGTGCGCAACGCCACCGTGAAGATCATCTCCAACAACCCCACCATGGGCGCCGCCATCGTGCGCCTCTTCTTCCACGACTGCTTTGTCAAG
GGTTGCGACGCTTCCATTCTG
CTGGACCAGTCGAGCAGCAACCCGCAGCCGGAGAAGCTGGCCATCCCGCTGCGCGGCTACGACGCCGTGAACACCATCAAAGCTGCCGTGGAGGCCGTCTGCCCCGGCGTGGTCTCCTGC
GCCGACATCCTAGCCTTCGCGGCGCGCGACTCCGCCATGGTCTCCGGCGGCTTCACCTTCCCCATGCTGGGCGGCCGCCGCGACGGGCTCGCCTCCGACCTGCGCGACATCTTCGGGAGC
ATCCCGGCCCCGAACATGCAGGTCCAGCAGCTCGTCGGCAGCTTCTCCGCCAAGGGCCTGAGCGCCGGCGACCTGGTGGCGCTCTCCGGCGCGCACTCCTTCGGCATCACCCACTGCTCC
TTCGTCACTCCCCGGCTGTACCCCGCCGTCGACCCGACCCTGAACGCCACCTACGCCGCCGCGCTGAGGAAGGTGTGCCCGCAGAGCAGCGGCGGCGGCACGGTGCTCAACAACAACAAC
ATCACGGACCCCAACGTGCTGAGCAACCAGTACTACAAGAACCTGGGCACCAGGGAGGTGCTCTTCAAGTCGGACCAGACGCTGACGAGCGACGCCGCCACGGCGAAAATGGTGCAGGAC
AACGCCGACAACCCGGTCGCGTGGATGGCGAGGTTCGCCGGAGCGATGGTGAGGATGGGCGGCATCGAGGTGCTCACCGGGAACCAGGGTGAGATCAGGAAGGTGTGCGGCGCCACCAAC
AGTGGCAGCTAA

Retrieve as FASTA