Entry information : SiPrx146 (Si036439m)
Entry ID 9488
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx146 (Si036439m)
Name (synonym) SiPrx146 (Si036439m)
Class Class III peroxidase    [Orthogroup: Prx044]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx146
start..stop
S start..stop
SbPrx04 555 0 34..345 43..357
ZmPrx92 549 0 19..345 24..355
OsPrx49 504 0 39..345 43..348
AhalPrx50 350 9e-121 1..345 1..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12974585..12974824 240 N° 2 12973969..12974157 189 N° 3 12973650..12973848 199 N° 4 12972292..12972698 407
complement(join(12972292..12972698,12973650..12973848,12973969..12974157,1297458 5..12974824))


exon

Literature and cross-references SiPrx146 (Si036439m)
DNA ref. Phytozome 12:   scaffold_9 (12974824..12972292)
Protein sequence: SiPrx146 (Si036439m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   346 (319)
PWM (Da):   %s   37913.74 (35131.0) Transmb domain:   %s   i5-27o
PI (pH):   %s   9.33 (9.18) Peptide Signal:   %s   cut: 27 range:27-345
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVRVLPLPPVLVLPLLLALVASVHGYGGYGDGKLRVGFYKDSCPDAEAIVREIVAKAVHKDPTANAPLLRLHFHDCFVRGCEGSVLINSTKGNTAEKDAKPNHTLDAFDVIDDIKEALEKRCPGTVSCADILAIAARDAVSLATKVVAKGEWSKDGNLYEVETGRRDGSVSSAKEAVKNLPDSFDGIRKLIKRFASKNLSLKDLTVLSGAHAIGKSHCPSIAKRLRNFTENRDSDPTLDRAYADRLRRRCWRPKDKTTELEMVPGSSETFDTAYYGLVTKRRGLFHSDEALLRNDVTKGLVYRYRDSPETTFLRDFGVSMVNMGRVGVLTGSQGEIRKKCAFVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTGCGAGTGCTTCCTCTTCCTCCAGTGCTCGTGCTTCCTCTGCTCCTGGCTCTGGTTGCTTCGGTCCATGGCTACGGCGGCTATGGCGACGGCAAGCTCAGGGTTGGGTTCTAC
AAGGATTCGTGCCCGGACGCCGAGGCGATCGTCCGGGAGATTGTCGCCAAGGCCGTCCACAAGGACCCGACGGCGAACGCGCCGCTGCTGAGGCTCCACTTCCACGACTGCTTCGTCAGG
GTACGCCGAATGGCCTCCTTGTCTTGTATCCTGAGTTCCTGACCATGTCTTTGCTTGTTAGTTGGTGAAGAAAGGAAGAGAGGATGCTGGATACGAAGTACTTACTAGCTAGCACTGTAG
ATTCTTTCAAAAATGCCTGTCCCTTTCTTTGATTCGTCTCTTTTTGGGATGCAATGGCATCCCATGCCGGTTCATCATAGATTCATCAGTCAGTAGCTCACAAAGTGAGACTGAAACTTT
ATCCGCAAAAGAGAACGAAAAGACTCCCCACGCGAATGTCCCAAAAATTGTCTTTTCGATGTTCTTTTAATCTGTTTCGACCTCACAGAACATACATTCGCCATGGACGATGTTTCATGT
TTGGACTTTGAAGTTCAAACCCACTCTCTGAAGCCAGATGCTAATTTCTTCTCCCCACTGGATGCAGGGCTGCGAGGGGTCGGTGCTCATCAACTCCACCAAGGGGAACACGGCGGAGAA
GGACGCCAAGCCCAACCACACGCTGGACGCCTTCGACGTCATCGACGACATCAAGGAGGCGCTGGAGAAGAGGTGCCCCGGCACCGTCTCCTGCGCCGACATCCTCGCCATCGCCGCCAG
GGACGCCGTCTCGCTG
GTGATTGCCTACAACAGCTTACCTCTTCAGTTTCCATCCATGGCTGCCTGATTCATTCCTTGCTCTGAAAATTAGCAATGGCCGTATCGAGTCTGATTGCTGTT
ACGTTCAATGGAGCAGGCTACGAAGGTGGTGGCCAAGGGGGAGTGGAGCAAGGACGGCAACCTGTACGAGGTGGAGACCGGCAGGCGGGACGGCAGCGTCTCCAGCGCCAAGGAGGCCGT
CAAGAACTTGCCCGACTCATTCGATGGAATCCGGAAGCTTATCAAGAGGTTTGCATCCAAGAACCTCAGCCTCAAGGATCTGACTGTTCTCTCAG
GTATTAATCTATGCCTTGCCAAGAA
ATGGTACTTTGAAGCTGTCTGTTTTTGTTAAGTGAAGGTAATTCTTTTTTGCTACTGGATTTGTATAAGGACATGCACATGAGTTGCACTATTGCTTTACTGAATGTGAAGGAAACATTC
CTTACGTTTAACAAAAAAATCAGCTTGACTAGATAAACTTCAAATCAACAGAGATTGATCTAAGTTATTATTATTTTTTTACAAATATTAGTGACCAAAATTTTGTATCAAGGCAAAAAA
GGCGATTTTTTTTCCATGTAGTAACAGTGCTTACTATTCATCCTTCGTTCTCGAGACAGCCGTTATATTGTCTTAATTTATGCTTAACCTGATGTTGCCCTTAACTACTATTGGCCTTTC
TAAAGTCTCTGGCTGAGATAGAAGCGTGTAAAGCCCCATCCTTGCCTTGATGATGTTCAGTTTGTCTATATTTGCTATGGTAACTAGATTTTGTTTTTATTTCCTCTGAATGTAGTAATT
TTAGGATTTTTGTCAAAAGTGAAGGGCACACCATTCAAGAGTCAGTGATGATCTCACAATATATTACTACTCATAATAAGTTTTGAAGTGATAGAAAGCCAATGAAGCAGGTTTCAATTC
AGTTTGACCCCTAGTGGTCCAGTGGACCAAGTGTCCAAGTTTATGATGATGTGACTCGCTCCTTGTATTTGAGAATTGATATTGGGTCGTGGCACGTGGTACGTAGGACTACGACCTTAT
TCAAAAGGGCTAGCAATTTGCACAATTCAAGAAACAATCACAAGGAGATTACAAAAAATCACAAAGTTAAGGAACATCAAAATTTTCAAATAGGATATGCCCGCGAAAGGAACCCAGTTA
TCGCAATTTCACTTTCCTACTTCAGACATTTCCTTGTGATCGAATATTTCAGCACTAACACACTACATGCATATGCTGCCATTCAGGTGCCCACGCGATCGGCAAGTCGCACTGCCCGTC
GATCGCCAAGCGGCTGCGCAACTTCACCGAGAACCGGGACAGCGACCCGACCCTGGACAGGGCGTACGCCGACAGGCTCAGGCGGCGGTGCTGGAGGCCCAAGGACAAGACGACGGAGCT
GGAGATGGTGCCGGGGAGCTCGGAGACGTTCGACACGGCGTACTACGGCCTCGTGACCAAGCGGAGGGGCCTCTTCCACTCCGACGAGGCCCTGCTGCGGAACGACGTCACCAAGGGGCT
CGTGTACCGGTACAGGGACTCGCCGGAGACGACGTTCTTGAGGGACTTTGGGGTGTCCATGGTGAACATGGGCAGGGTGGGCGTGCTCACCGGCAGCCAGGGGGAGATCAGGAAGAAATG
TGCCTTCGTTAAT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTGCGAGTGCTTCCTCTTCCTCCAGTGCTCGTGCTTCCTCTGCTCCTGGCTCTGGTTGCTTCGGTCCATGGCTACGGCGGCTATGGCGACGGCAAGCTCAGGGTTGGGTTCTAC
AAGGATTCGTGCCCGGACGCCGAGGCGATCGTCCGGGAGATTGTCGCCAAGGCCGTCCACAAGGACCCGACGGCGAACGCGCCGCTGCTGAGGCTCCACTTCCACGACTGCTTCGTCAGG
GGCTGCGAGGGGTCGGTGCTCATCAACTCCACCAAGGGGAACACGGCGGAGAAGGACGCCAAGCCCAACCACACGCTGGACGCCTTCGACGTCATCGACGACATCAAGGAGGCGCTGGAG
AAGAGGTGCCCCGGCACCGTCTCCTGCGCCGACATCCTCGCCATCGCCGCCAGGGACGCCGTCTCGCTG
GCTACGAAGGTGGTGGCCAAGGGGGAGTGGAGCAAGGACGGCAACCTGTAC
GAGGTGGAGACCGGCAGGCGGGACGGCAGCGTCTCCAGCGCCAAGGAGGCCGTCAAGAACTTGCCCGACTCATTCGATGGAATCCGGAAGCTTATCAAGAGGTTTGCATCCAAGAACCTC
AGCCTCAAGGATCTGACTGTTCTCTCAG
GTGCCCACGCGATCGGCAAGTCGCACTGCCCGTCGATCGCCAAGCGGCTGCGCAACTTCACCGAGAACCGGGACAGCGACCCGACCCTGGAC
AGGGCGTACGCCGACAGGCTCAGGCGGCGGTGCTGGAGGCCCAAGGACAAGACGACGGAGCTGGAGATGGTGCCGGGGAGCTCGGAGACGTTCGACACGGCGTACTACGGCCTCGTGACC
AAGCGGAGGGGCCTCTTCCACTCCGACGAGGCCCTGCTGCGGAACGACGTCACCAAGGGGCTCGTGTACCGGTACAGGGACTCGCCGGAGACGACGTTCTTGAGGGACTTTGGGGTGTCC
ATGGTGAACATGGGCAGGGTGGGCGTGCTCACCGGCAGCCAGGGGGAGATCAGGAAGAAATGTGCCTTCGTTAAT

Retrieve as FASTA