Entry information : SiPrx149 (Si036462m)
Entry ID 9491
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx149 (Si036462m)
Name (synonym) SiPrx149 (Si036462m)
Class Class III peroxidase    [Orthogroup: Prx068]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx149
start..stop
S start..stop
SiPrx147 552 0 26..342 25..341
SiPrx152 540 0 25..342 24..336
SiPrx150 537 0 25..342 20..338
ZmPrx34 528 0 26..342 26..337
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9491' 'join(34358327..34358566,34358692..34358883,34360740..34360902,34361114..34361544)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 34358327..34358566 238 N° 2 34358692..34358883 190 N° 3 34360740..34360902 161 N° 4 34361114..34361544 429
join(34358327..34358566,34358692..34358883,34360740..34360902,34361114..34361544 )


exon

Literature and cross-references SiPrx149 (Si036462m)
DNA ref. Phytozome 12:   scaffold_9 (34358327..34361544)
Protein sequence: SiPrx149 (Si036462m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (310)
PWM (Da):   %s   36769.57 (33559.0) Transmb domain:   %s   o10-32i
PI (pH):   %s   4.29 (4.16) Peptide Signal:   %s   cut: 33 range:33-342
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSHSPRSASGATAVMAVLFVAALCLHGAMAQPLREDYYDGTCPDAYNIVKQVLIDAHESDERIYASLIRLHFHDCFVQGCDGSILLDNMTGMQSEKESPPNNGSARGYEVVDAVKCAL
EDACPGVVSCADILAIAAEISVELSGGPSWGVLLGRLDGRTSDFNGSQDLPAPFENLTTLQSKFQAVGLNDVDLVALSGAHTFGRVQCANVADQPADRLYNFSGTNMPDPTLDSAYRAFL
SQRCPRNGDSSVLNDLDPTTPDTFDNHYYTNIEVNRGFLTSDQELKSAPEAQGTTAPIVDQFASSQDAFFASFAQSMINMGNIRPVTDPSQGEVRTNCRRIN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCTCCCATTCTCCTCGTTCTGCCTCCGGCGCCACCGCCGTCATGGCCGTGCTGTTTGTGGCGGCCCTGTGCCTGCACGGCGCCATGGCGCAACCGCTGCGCGAGGACTACTAC
GACGGCACGTGCCCTGACGCCTATAACATCGTGAAGCAGGTGCTCATCGACGCGCACGAGTCGGACGAGCGCATCTACGCCAGCCTCATCCGCCTCCACTTCCACGATTGCTTCGTCCAA
AAGTAACCTTCCTCTTCTCTCTGCTAGGCCGCCATGCCCGTGCCCGTGCCCATGCGTGATCATGCAGCATTCACGATGCATTATTGTTTCATTGGTGAGTGTGGTGATGACCGTTTATTG
TTCATAGGGCTGCGACGGGTCGATTCTGCTGGACAACATGACAGGGATGCAGTCCGAGAAGGAGTCACCGCCCAACAACGGCTCGGCGCGCGGGTACGAGGTGGTGGACGCCGTCAAGTG
CGCGCTGGAGGACGCCTGCCCTGGCGTCGTCTCCTGCGCCGACATCCTCGCTATCGCCGCGGAGATCTCCGTCGAGCTG
TGGTACGTACCCGCGGCTGCCTAGATACAACCTAGCTTCAT
GGCATACTATACTACCATTGTGATCATTGATGGACGTAGTCACGTAGCGGCAGGTGCGCGGTAGCTTTCGATGAGGGTTGAGGGGCATGCATGAATCTTGATTTGACCGTCAACAACATG
CTATAACTTTATTGACACCATTTAAAAATTATAGGGAAAAAATGATTGCGTAGACATGTCGGTGCATTCATGCAAACCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTGAGTTTATTTGAAATTGAAAAATATTTGAAAAAGACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTTATCCGTTCT
CTACTCTGGCTCCCATCTATCTGCTTTGGTCAGTCATCATCCTCTTTCTCCATCTTCCCCGCAAGCTGCCGCCCCTCCGTCCCTCCATCCCAGCCTCGCCATGCTGCTTCCCATGTTGCT
GCTCCACCTCGCTGTGCCGCTTCCCCATGCTGTGCTGCATGCTCCTGCCATTGCTCCCCTGCCCAAGCGCGCAGGGCCACGGCTAAGGCATGAATGGCAGGCGGCGTGCTCCCGCCAGCG
GGTCGACGGTGGCGAGTGGCGTGCTCGCGCCGACGGGTCGGTTGTTGCGGGCGGCACGCCCGCTCTAGCCATGGAAGGTGCAGCTGGCCTCAATCATCGGCAAGCCTAAAGCCTTCAACC
TCTAGGTACAACACGATTTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTC
AAGAGAGCTAGTATTGCGGGGCTTCTTTGGTGGAACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACTTCCCATGTCCTTTC
GTCAATATATATGTCCATTACGTTTGGTTCGGTACTAATGCGCGAAATAAGTACCGGGTCCAAATTATCAGTCCTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGATAC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCTCCTAGCTGTTCGTGAATTTTTTCATTATTTTTTGGACACAAATGTTGCATTTAATACTGGGTATTTTGGTCG
GTACTAAATGACATGACATTTAGTACCGAAGAAGTGATACTAGTGGCGCTGGTACTAAAGGGTTCCGACCGATAATAGCTGGAAGTCAATCCTCCAGTAGTGTTCAATGATTTACACATG
GTAGTATGGGAAGTAGCTAGCTACTGGCCACAGCTTACGTGTCTACATGAGCAGACGATTAATGTACAGAAAAGCTGCTAGAAATATTGACACGTAAATATTGATTTATAGCTAATCTGC
TCGTCCATAACATGCAGTCGGGAGGACCCAGCTGGGGTGTACTCCTGGGAAGACTGGACGGCAGAACGTCAGACTTCAACGGCTCCCAGGACCTGCCGGCGCCCTTCGAAAATCTCACCA
CGCTCCAGAGTAAGTTCCAAGCCGTCGGCCTTAACGACGTCGACCTCGTCGCCCTCTCAG
AGGTACGCGCGTGAACAATAGTTGGCATATATTCTACGTCGAATTTTCTAAATGTATAGA
TAGAAAATTCTATGTACATAGTAAAGTCTATGTACCTAGAAAAACTCAGACAACCTACATTTTATACTACATTTTGTAAAGGAGCATCACACTATTGCTCTGACCAACGTTAACGCCCCA
TCTGTTTCTCTTGAATGCATGTGACCCACACAGGGGCTCACACGTTTGGCAGGGTACAATGTGCAAACGTCGCCGACCAACCGGCCGACCGGCTCTACAACTTCAGCGGCACCAACATGC
CGGACCCGACCCTGGACTCGGCTTACCGAGCATTCCTATCGCAGAGGTGCCCGAGGAATGGCGACAGTTCGGTCTTGAACGACCTCGATCCAACGACGCCGGACACCTTCGACAACCACT
ACTACACCAACATCGAAGTGAACCGGGGGTTCCTCACCTCCGATCAGGAGCTCAAGTCCGCACCCGAAGCGCAGGGCACCACGGCACCGATTGTCGATCAGTTCGCGAGCAGCCAGGATG
CCTTCTTTGCTAGTTTTGCACAGTCCATGATCAACATGGGGAACATAAGGCCAGTGACGGATCCATCCCAAGGGGAAGTCAGGACAAACTGCAGAAGGATCAAC

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCTCCCATTCTCCTCGTTCTGCCTCCGGCGCCACCGCCGTCATGGCCGTGCTGTTTGTGGCGGCCCTGTGCCTGCACGGCGCCATGGCGCAACCGCTGCGCGAGGACTACTAC
GACGGCACGTGCCCTGACGCCTATAACATCGTGAAGCAGGTGCTCATCGACGCGCACGAGTCGGACGAGCGCATCTACGCCAGCCTCATCCGCCTCCACTTCCACGATTGCTTCGTCCAA
GGCTGCGACGGGTCGATTCTGCTGGACAACATGACAGGGATGCAGTCCGAGAAGGAGTCACCGCCCAACAACGGCTCGGCGCGCGGGTACGAGGTGGTGGACGCCGTCAAGTGCGCGCTG
GAGGACGCCTGCCCTGGCGTCGTCTCCTGCGCCGACATCCTCGCTATCGCCGCGGAGATCTCCGTCGAGCTG
TCGGGAGGACCCAGCTGGGGTGTACTCCTGGGAAGACTGGACGGCAGA
ACGTCAGACTTCAACGGCTCCCAGGACCTGCCGGCGCCCTTCGAAAATCTCACCACGCTCCAGAGTAAGTTCCAAGCCGTCGGCCTTAACGACGTCGACCTCGTCGCCCTCTCAG
GGGCT
CACACGTTTGGCAGGGTACAATGTGCAAACGTCGCCGACCAACCGGCCGACCGGCTCTACAACTTCAGCGGCACCAACATGCCGGACCCGACCCTGGACTCGGCTTACCGAGCATTCCTA
TCGCAGAGGTGCCCGAGGAATGGCGACAGTTCGGTCTTGAACGACCTCGATCCAACGACGCCGGACACCTTCGACAACCACTACTACACCAACATCGAAGTGAACCGGGGGTTCCTCACC
TCCGATCAGGAGCTCAAGTCCGCACCCGAAGCGCAGGGCACCACGGCACCGATTGTCGATCAGTTCGCGAGCAGCCAGGATGCCTTCTTTGCTAGTTTTGCACAGTCCATGATCAACATG
GGGAACATAAGGCCAGTGACGGATCCATCCCAAGGGGAAGTCAGGACAAACTGCAGAAGGATCAAC

Retrieve as FASTA