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Entry information : SiPrx29 (Si006871m)
Entry ID 9527
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-12 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-12-22 (Christophe Dunand)
Peroxidase information: SiPrx29 (Si006871m)
Name (synonym) SiPrx29 (Si006871m)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx29
start..stop		 S start..stop
SbPrx139 572 0 19..330 21..331
ZmPrx20 567 0 22..330 21..328
SofPrx01 560 0 19..330 21..331
TaPrx18-1A 525 0 23..328 25..330
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 37834473..37834682 208 N° 2 37834156..37834347 190 N° 3 37833885..37834047 161 N° 4 37831386..37831813 426
complement(join(37831386..37831813,37833885..37834047,37834156..37834347,3783447 3..37834682))


exon

Literature and cross-references SiPrx29 (Si006871m)
DNA ref. Phytozome 12:   scaffold_4 (37831084..37834782)
Protein sequence: SiPrx29 (Si006871m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (307)
PWM (Da):   %s   35459.02 (33296.8) Transmb domain:   %s   i5-22o
PI (pH):   %s   6.92 (6.51) Peptide Signal:   %s   cut: 24 range:24-330
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARMAVVAVVVVVAAVLAGGARAQLREGFYEHSCPQAEKIIKDYV
MEHIPHVPSIAATLLRTHFHDCFVRGCDASVLLNATGGNEAERDAAPNQTLRGNGFIDRVKALVEKECPGVVSCADILALTARDSVVATGGPSWSVPTGRRDGTVSIKQEALDQIPAPTMNFTELLQSFQNKSLDLADLVWLSGA
HTIGIAHCNSFTERLYNFTGRGGPGDADPSLDPLYAANLRRTKCKTPTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAAAKADILTAVNSPPEFFSQVFARSMVKMGAI
EVKTGSEGEIRKHCAIVNKH

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGAATGGCGGTGGTGGCGGTGGTGGTGGTGGTGGCAGCCGTGCTCGCCGGCGGCGCGCGGGCGCAGCTGAGGGAGGGGTTCTACGAGCACAGCTGCCCGCAGGCGGAGAAGATC
ATCAAGGACTACGTGATGGAGCACATCCCCCACGTGCCATCCATCGCCGCCACCCTCCTCCGCACGCACTTCCACGACTGCTTCGTCAGGGTACGTGCCAGTGTCTAGTGTGTGCCGGCG
TGCTCTGTTCTTCTTCTTCTTCTTCCTGCCGGCGCGGCAGGGTACGTGGCGACGGACGCTGACGGCGGCCAATGCCGCCTCCTTCTTCCCTGCAGGGGGCTGCGACGCGTCGGTGCTGCT
GAACGCGACGGGCGGGAACGAGGCGGAGAGGGACGCGGCGCCCAACCAGACGCTGCGCGGCAACGGCTTCATCGACCGCGTCAAGGCGCTCGTCGAGAAGGAGTGCCCCGGCGTCGTCTC
CTGCGCCGACATCCTCGCCCTCACCGCCCGCGACTCCGTCGTCGCCACCGTGAGCACCCTTCCACCCGCTCCCCCCGCCGAAGCACCGCCGGCGACATTGCCGCGCCGACGCGCGGCAGC
TAGCTCGTCGTCGCTGACACGCTGAGAGTGAGTGCAGGGGGCGGGCCGTCCTGGAGCGTGCCGACGGGGCGGCGCGACGGCACGGTGTCCATCAAGCAGGAGGCGCTGGACCAGATCCCC
GCGCCCACCATGAACTTCACCGAGCTCCTCCAGTCGTTCCAGAACAAGAGCCTCGACCTCGCCGACCTCGTCTGGCTCTCAGGTAACTCAAAACCTCTCTCCCTCCTCCCTCCTCCCTCC
ATTGCCACCGCCATTCAGAGCTCATCAGTTACTACTTCACTGCTTTCACCTGACGACAACTTCAACAAATCTTTGGTAAAAAAAAACAAGCAAGCAAACAAGAAGATTCTTTCCACATGC
CAATCAACCTAGCTAATTTTACACAAGGAAACAAATCAACAGTGACAGGGATGGTTATTAGTTACTAGTCCTCGGATTAGAATGGTTTTAGCTATCTGTTTAAACGTGGTGATCCTAACA
CGGCACCGACACAGAGTGATGTTACGTTTGCTGAGTGAATCATCCATCATTTGTTCGGAGAATACGTTTGCTCAGGCTGGCTGGCATAAGCTGTGAGATTGTACTTGGTTACTAGAAACA
GTACTGGTAGTAGCTTTGGCAAATTGTTTATGTGTTGAGCCGGCAGTCAGCACACGTAGACACGCTCCTACCCACCCACTCTCTCTCAGCAGGACCAGTCCAAATGTCCCTGAGCTAGAT
TTTCTTTTTCTTTTGCGAAGAATGTCCCTGAGCTAGATGGCTCCAAGGTAAACTTCTTTAGCTTGCCATGTGCATTGTACAGCAGAACAAAACAGTAGGAGCCTAGAACATTTTAGCAGC
AGTGAGTTCCACTCCATGTCATGGCCAGATTGGACAGACCTGAACATGCAGAGAGCCACAGACAGCGTGTCTTGATTACCGACTACTAGTATTAGTATTACATTACTGAATGGCACATTT
ATCATCAGCCAGATCTATGTACCCAAAAAAGACCAAAGTTCTGTCAGTCAAATCTGCACATAAAAGGCCAGAGTTCAGCATGATGCATGAGTGGCGTTTAGTGGCGTTGCATCATGGGCA
AACCAAATGTTAGGGAACTTACTTAACCTTGTCATTCTAGAATGAATCTAGCCAACAACAAAGGAGGCTTTTAAATTGGACAACTACCAGTCTGTTCATCCCCAGTCTTCGGATCAGTGC
CGTGTATAGCACATATGCACTTAGTCCTTGGGAAGAGACGCAGTATGGTAGTTAACATCTAAATGATGGTTTTGTCCTGTCTATGTAGCCAGAGTTTGGTAGCTGGAAAATGATTCCATA
TCACAATAGGGCATGGAACGCATACAGACAACTCCCCAGACTGAAAGCTCTGTGATACTAGCTTGCTAGTACTAAACTACAAGGAGAACAATGTCTAAAAAGTTAGCATTGGGGTAGTAA
CGGGAAGAGATGTAACTAACCACCTTGGATGTAGTAGCATTGTTCAGAGCATGTTATCTTGCTAGAACAGGATCGATGACTTGAGTGAAAGTTGGAATCTGAGTACTTGTATGCACGTCA
TAATGTGATAAGGACGTCTTGGACTGCAGTCACTTGACTGGTTTGTTGTGTCACTGACGGGCATCGCATCTTTTATACGTGGACAACCTATCCTGATGCCGACATGCACGCTGCTGCTAA
CTGCCATAAAATCAGTCTGTTCTGATTATTCTAACTTTTAAGGGCAACCACAATATTTTTTTGGCAAAGCAGGGAGGTTCTGAACGAGTACTACAATATTACTATCAGAGTAGTAAAAAA
TCATCTATATCCACCTCTGCCGCATACAAGTATAATAATTAAATATTCTATGGGCAGTCCATACCCTATCGTACTATGGGTGACTTTTTTTATTCTTTTCATATGGACTACTTGCACAAT
AATACTAGGAGGCCGAATTGAATAACTACTTCTCTACCACATTATGGACAGAAACTCCTGAACGAGAAGTAGGTTGATGCTGCATTGATACCATCATGTGCACACGACATTCCAAGCTAG
GTGACAACTGCAGATAGAGTTATGAACCTATCGTATTTGTATCAGTTGCACCGAATGGTTTCGAAAACTCTAAGCTGAATAATTTCCTCCAAATTCTTAGCCATCCTGCAACAGTCACTG
AATTACTACTGACTACTGTTATGTGCTAATCCGTGGTAATTTGCTAGCTGAACATTGTGGCTGCAACTCACCTGCTGTCTGCTGATGACCGATCACCTATGCTGTTCATGCAGGGGGGCT
CACACCATCGGCATCGCGCACTGCAACTCCTTCACGGAGCGGCTCTACAACTTCACCGGGCGCGGTGGCCCCGGCGACGCGGACCCGTCGCTGGACCCGCTGTACGCGGCGAACCTCCGC
CGGACCAAGTGCAAGACGCCGACGGACAACACCACCATCGTCGAGATGGACCCGGGGAGCTTCCGGACCTTCGACCTCAGCTACTACCGTGGCGTGCTCAAGCGCCGGGGCCTGTTCCAG
TCCGACGCCGCGCTCATCACCGACGCGGCGGCCAAGGCCGACATCCTCACCGCGGTGAACTCGCCGCCCGAGTTTTTCTCCCAGGTGTTCGCGCGCTCCATGGTGAAGATGGGCGCCATC
GAGGTCAAGACCGGGTCCGAGGGCGAGATCAGGAAGCACTGCGCCATCGTCAACAAGCACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGAATGGCGGTGGTGGCGGTGGTGGTGGTGGTGGCAGCCGTGCTCGCCGGCGGCGCGCGGGCGCAGCTGAGGGAGGGGTTCTACGAGCACAGCTGCCCGCAGGCGGAGAAGATC
ATCAAGGACTACGTGATGGAGCACATCCCCCACGTGCCATCCATCGCCGCCACCCTCCTCCGCACGCACTTCCACGACTGCTTCGTCAGGGGCTGCGACGCGTCGGTGCTGCTGAACGCG
ACGGGCGGGAACGAGGCGGAGAGGGACGCGGCGCCCAACCAGACGCTGCGCGGCAACGGCTTCATCGACCGCGTCAAGGCGCTCGTCGAGAAGGAGTGCCCCGGCGTCGTCTCCTGCGCC
GACATCCTCGCCCTCACCGCCCGCGACTCCGTCGTCGCCACCGGCGGGCCGTCCTGGAGCGTGCCGACGGGGCGGCGCGACGGCACGGTGTCCATCAAGCAGGAGGCGCTGGACCAGATC
CCCGCGCCCACCATGAACTTCACCGAGCTCCTCCAGTCGTTCCAGAACAAGAGCCTCGACCTCGCCGACCTCGTCTGGCTCTCAGGGGCTCACACCATCGGCATCGCGCACTGCAACTCC
TTCACGGAGCGGCTCTACAACTTCACCGGGCGCGGTGGCCCCGGCGACGCGGACCCGTCGCTGGACCCGCTGTACGCGGCGAACCTCCGCCGGACCAAGTGCAAGACGCCGACGGACAAC
ACCACCATCGTCGAGATGGACCCGGGGAGCTTCCGGACCTTCGACCTCAGCTACTACCGTGGCGTGCTCAAGCGCCGGGGCCTGTTCCAGTCCGACGCCGCGCTCATCACCGACGCGGCG
GCCAAGGCCGACATCCTCACCGCGGTGAACTCGCCGCCCGAGTTTTTCTCCCAGGTGTTCGCGCGCTCCATGGTGAAGATGGGCGCCATCGAGGTCAAGACCGGGTCCGAGGGCGAGATC
AGGAAGCACTGCGCCATCGTCAACAAGCACTAG

Retrieve as FASTA