View Redoxidase 9536

Entry information : SiPrx38 (Si007872m)

Entry ID	9536
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2011-12-14 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-12-07 (Qiang Li)

Peroxidase information: SiPrx38 (Si007872m)

Name (synonym)

SiPrx38 (Si007872m)

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx38 start..stop	S start..stop
ZmPrx57	462	1.22e-164	1..338	1..348
ZmPrx71	460	1.1e-163	23..342	34..351
SbPrx80	456	4.36e-162	28..341	39..351
BdiPrx113	455	7.29e-162	23..339	26..340

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	9528299..9529324	1024
complement(join(9528299..9529324))

Literature and cross-references SiPrx38 (Si007872m)

DNA ref.	Phytozome 12: scaffold_4 (9529324..9528299)

Protein sequence: SiPrx38 (Si007872m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	342 (316)
PWM (Da):	36082.33 (33219.8)
PI (pH):	8.57 (8.91)	Peptide Signal:	cut: 27 range:27-342

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MDTHRLHTSA LFLLLLVIDA AMVTEAKLVP NYYRKTCPRA ERIVTDVVSQ KQLSHPTTAA GVLRVFFHDC FVSGCDASVL VSPTAFARSE RDAAQSQSLP GDAFEAVARA KTALELACPG VVSCADVLAI AARDLVTMTG GPFYPLRLGR KDALASSSAA PDAELPLANS TVPRLVAMFA AKGFTVQELV ALSGAHTLGF AHCAEFADRI FRRGNKGxxx xxxxxDPAMN PAYAKGLHDA
CRNYQRDPTI AVFNDVMTPG KFDNMYFVNL QRGLGLLSTD QELWTDPRTR PFVQRYAANQ TAFFADFARA IVKLGVMGVK TGRDGEVRRR CDMFNGNPVP GG

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGACACTC ACCGTTTGCA CACATCGGCG CTCTTCCTCC TCCTCCTCGT CATCGACGCG GCGATGGTGA CGGAGGCCAA GCTGGTGCCG AACTACTACA GAAAGACGTG CCCGCGCGCG GAGCGGATCG TGACGGACGT GGTCTCCCAG AAGCAGCTCT CGCACCCGAC CACCGCGGCG GGTGTGCTCC GCGTCTTCTT CCACGACTGC TTCGTCAGCG GCTGCGACGC GTCCGTGCTG GTGTCCCCGA CCGCGTTCGC CCGGTCCGAG CGCGACGCCG CGCAGAGCCA GTCGCTCCCG GGGGACGCCT TCGAGGCCGT GGCGCGCGCC AAGACGGCGC TCGAGCTCGC GTGCCCCGGC GTCGTGTCCT GCGCCGACGT GCTCGCCATC GCGGCCCGGG ACCTCGTCAC CATGACCGGG GGCCCCTTCT ACCCGCTCCG CCTGGGACGC AAGGACGCGC TCGCCTCGTC CTCCGCCGCG CCCGACGCCG AGCTCCCGCT CGCCAACTCC ACCGTGCCAC GCCTCGTCGC CATGTTCGCC GCCAAGGGGT TCACGGTGCA GGAGCTCGTC GCGCTCTCCG GCGCGCACAC GCTGGGGTTC GCGCACTGCG CCGAGTTCGC CGACCGCATC TTCCGCCGGG GCAACAAGGG Tnnnnnnnnn nnnnnnnnnn nnnACGACCC GGCCATGAAC CCGGCGTACG CCAAGGGGCT GCATGACGCG TGCAGGAACT ACCAGCGGGA CCCGACCATC GCGGTGTTCA ACGACGTCAT GACGCCGGGC AAGTTCGACA ACATGTACTT CGTCAACCTC CAACGCGGCC TGGGCCTGCT CAGCACGGAC CAGGAGCTCT GGACCGATCC CCGGACGCGG CCATTCGTGC AGCGCTACGC CGCCAACCAG ACGGCCTTCT TCGCCGACTT CGCGCGCGCC ATCGTGAAGC TCGGCGTCAT GGGCGTCAAG
ACGGGGCGGG ACGGGGAGGT GCGCCGGCGG TGCGACATGT TCAACGGAAA CCCCGTCCCG GGGGGC

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA