View Redoxidase 9553

Entry information : SiPrx58 (Si011748m)

Entry ID	9553
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2011-12-15 (Qiang Li)

Peroxidase information: SiPrx58 (Si011748m)

Name (synonym)

SiPrx58 (Si011748m)

Class

Class III peroxidase [Orthogroup: Prx016]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx58 start..stop	S start..stop
SbPrx89	466	4.12e-167	27..329	1..309
TaPrx211-1A	442	5.96e-157	16..329	29..343
TaPrx211-1D	428	1.18e-151	34..329	39..335
OsPrx52	412	2.06e-145	36..330	35..331

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1168549..1169538	988
join(1168549..1169538)

Literature and cross-references SiPrx58 (Si011748m)

DNA ref.	Phytozome 12: scaffold_7 (1168549..1169538)

Protein sequence: SiPrx58 (Si011748m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	330 (296)
PWM (Da):	35287.49 (31595.4)
PI (pH):	5.15 (4.77)	Peptide Signal:	cut: 35 range:35-330

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MGHLHRFRLV DDLPGLLRLL LLLVLAMAAA TSNALDAGYY AATCPDAEAI VSNAMSRLHY NDPTLAPALI RLLFHDCFVR GCDASVLISP TPRYSSERAA IPNHTLRGFP AVDAVKRALE AACPGAVSCA DALALMARDA VSLLGGARYG VALGRRDGTQ SNPWEVDLPA PFARLDDVLA YFAARGFSAE EAVVLLGGGH TVGGAHCGSF RYRLTQPDGT MDEQVRCEML DACGAADLPL
DTDPATFLDP DTPFAVDNNY YAQLMVNRTL LQVDQEAATH HATAHHVAYY AASNDAFLQR FAEAMEKLSN VGVLEGDAGE VRKVCSRYNT

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGGCCATC TTCATCGGTT CCGGCTAGTC GACGATCTGC CGGGCCTCCT CCGCCTGCTG CTGCTGCTGG TGCTGGCAAT GGCGGCGGCA ACCAGCAACG CTCTGGACGC GGGGTACTAC GCGGCGACGT GCCCGGACGC GGAGGCGATA GTTTCGAACG CCATGTCGCG GCTGCACTAC AACGACCCGA CCCTGGCGCC GGCCCTCATC CGCCTCCTCT TCCACGACTG CTTCGTCCGC GGCTGCGACG CCTCCGTCCT CATCTCCCCC ACGCCGCGCT ACTCCTCCGA GCGCGCCGCC ATCCCCAACC ACACCCTCCG CGGCTTCCCC GCCGTCGACG CCGTCAAGCG CGCGCTCGAG GCTGCCTGCC CGGGCGCCGT CTCCTGCGCC GACGCGCTCG CGCTCATGGC CCGGGACGCG GTGTCCCTCC TCGGCGGCGC CCGCTACGGC GTCGCGCTGG GGCGGCGCGA CGGCACGCAG TCCAATCCGT GGGAGGTCGA CCTCCCTGCG CCCTTCGCCA GGCTCGACGA CGTGCTCGCC TACTTCGCCG CCAGGGGGTT CTCCGCCGAG GAGGCCGTCG TGCTCCTCGG CGGCGGCCAC ACCGTCGGCG GCGCGCACTG CGGCTCCTTC CGCTACCGCC TCACCCAGCC CGACGGCACC ATGGATGAGC AGGTCCGCTG CGAAATGCTT GACGCCTGCG GCGCCGCCGA CCTGCCGCTC GACACCGACC CCGCCACGTT CCTCGACCCG GACACGCCGT TCGCCGTCGA CAACAACTAC TACGCGCAGC TCATGGTCAA CAGGACGCTG CTGCAGGTCG ACCAGGAGGC CGCCACGCAC CACGCCACCG CGCACCACGT CGCGTACTAC GCCGCCAGCA ACGACGCGTT CCTGCAGAGG TTCGCCGAGG CCATGGAAAA GCTCAGCAAC GTCGGCGTGC TCGAGGGAGA CGCCGGAGAG
GTCAGGAAGG TCTGCTCTAG GTACAACACT

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA