View Redoxidase 9565

Entry information : SiPrx74 (Si017751m)

Entry ID	9565
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2011-12-15 (Qiang Li)

Peroxidase information: SiPrx74 (Si017751m)

Name (synonym)

SiPrx74 (Si017751m)

Class

Class III peroxidase [Orthogroup: Prx018]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx74 start..stop	S start..stop
ZmPrx118	546	0	1..331	1..337
SbPrx81	536	0	1..331	3..336
PedPrx06	517	0	1..331	1..337
SiPrx108	511	0	5..332	6..337

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	35218758..35219750	991
complement(join(35218758..35219750))

Literature and cross-references SiPrx74 (Si017751m)

DNA ref.	Phytozome 12: scaffold_1 (35219750..35218758)

Protein sequence: SiPrx74 (Si017751m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (310)
PWM (Da):	35832.83 (33385.5)
PI (pH):	6.04 (5.39)	Peptide Signal:	cut: 22 range:22-331

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MMKPWLLFAW AVLAASAVAR ASPPLQVGFY EHSCPQAEDI VRNAVRRAVA RDPGLAAGLI RMHFHDCFVR GCDASILLES TPWQKAERDS TANNPSLRGF EVIDEAKAIV EAHCPRTVSC ADIVAFAARD GAALAGGIDY RVPSGRRDGR VSVEGEVLDG NVPFPTFTVG ELVENFRRKG LSADDMVTLS GAHSIGRSHC SSVTDRLYNF QGEPGRTDPE LDPAYAADLK RRCPPSMSNM
DYPTTVPLDP VTPAGLDNQY FKNVLAHKVP FTSDQALLDS PWTAGLVAFH AAVGQAWEAK FAAAMVKMGA IEVLTGQEGE IREKCSVVNH Y*

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGATGAAGC CGTGGCTACT GTTTGCATGG GCCGTGCTGG CGGCCTCCGC GGTGGCGCGC GCGTCCCCGC CCCTGCAGGT CGGGTTCTAC GAGCACTCGT GCCCGCAGGC CGAGGACATC GTGCGCAACG CCGTCCGCCG CGCCGTCGCC AGGGACCCCG GCCTCGCCGC CGGCCTCATC AGGATGCACT TCCACGACTG CTTCGTCAGG GGCTGCGACG CGTCGATCCT GCTCGAGTCG ACGCCGTGGC AAAAGGCGGA GCGGGACTCG ACGGCCAACA ACCCGAGCCT GCGCGGGTTC GAGGTCATCG ACGAGGCCAA GGCCATCGTG GAGGCGCACT GCCCGCGCAC CGTGTCCTGC GCCGACATCG TCGCCTTCGC GGCGCGCGAC GGGGCCGCGC TCGCCGGCGG CATCGACTAC CGCGTCCCCT CCGGCCGCCG CGACGGCCGC GTGTCCGTCG AGGGCGAGGT GCTGGACGGC AACGTGCCGT TCCCGACCTT CACCGTCGGG GAGCTCGTCG AGAACTTCAG GCGCAAGGGG CTCTCGGCCG ACGACATGGT CACGCTCTCC GGTGCGCACA GCATCGGCCG GTCCCACTGC TCGTCGGTCA CGGATCGGCT GTACAACTTC CAGGGCGAGC CGGGGCGGAC GGACCCGGAG CTCGACCCGG CGTACGCGGC GGACCTGAAA CGGCGGTGCC CGCCGTCGAT GAGCAACATG GACTACCCCA CGACGGTGCC CCTGGACCCG GTGACGCCGG CCGGCCTCGA CAACCAGTAC TTCAAGAACG TGCTGGCGCA CAAGGTGCCC TTCACCTCCG ACCAGGCGCT GCTCGACAGC CCCTGGACCG CGGGGCTCGT CGCGTTCCAC GCCGCCGTTG GGCAGGCGTG GGAGGCAAAG TTCGCCGCGG CGATGGTCAA GATGGGCGCC ATCGAGGTAC TCACCGGCCA AGAGGGTGAG
ATCAGGGAGA AGTGCTCCGT GGTCAACCAC TAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA