The peroxidases and oxidases database
Entry information : SiPrx78 ( Si017813m)
Entry ID 9569
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-07 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-15 (Christophe Dunand)
Peroxidase information: SiPrx78 ( Si017813m)
Name (synonym) SiPrx78 ( Si017813m)
Class Class III peroxidase    [Orthogroup: Prx148]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx78
start..stop		 S start..stop
BdiPrx97 509 0 8..320 7..324
TaPrx130-1A 498 2e-179 6..320 18..329
SbPrx72 497 3e-179 27..320 26..321
ZmPrx67 496 8e-179 25..320 25..320
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2001957..2002169 213 N° 2 2001673..2001867 195 N° 3 2001016..2001567 552  
complement(join(2001016..2001567,2001673..2001867,2001957..2002169))


exon

Literature and cross-references SiPrx78 ( Si017813m)
DNA ref. Phytozome 12:   scaffold_1 (2002169..2001016)
Protein sequence: SiPrx78 ( Si017813m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (296)
PWM (Da):   %s   32688.21 (30266.8)  
PI (pH):   %s   5.05 (4.86) Peptide Signal:   %s   cut: 25 range:25-320
Sequence 457
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATRLLLLMAAALVLLVARGSDAQLSAGFYSASCPSVHGVVRQVMSQAVMNNSRSGAAILRLFFHDCFVNGCDASLLLDDTPTTPGEKGAGANAGGSTFGFDLIDDIKTQVEAACPATVSCADILALAARDSVNLLGGPSWAVPLGRRDATSPNATGAATDLPGPDSSLDRLVAAFAAKGLTSRDLAALSGAHTVGMARCLSFRTRVYCDDNVSPAFASQGRQLCPASGGDATAAPLDASTPAEFDNGYYRNLVAGAGLLHSDQELFNNGPLDSLVRLYSANGAAFSSDFAASMVRLGNVSPLTGSAGEIRIDCRKVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACGCGGCTGCTCCTCCTGATGGCGGCGGCGCTCGTCCTCCTGGTGGCGCGCGGCTCCGACGCGCAGCTCTCGGCGGGGTTCTACTCGGCGAGCTGCCCCAGCGTGCACGGC
GTCGTGCGCCAGGTCATGTCGCAGGCCGTCATGAACAACTCGCGCAGCGGCGCCGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGTGAGTATAGCAAAAATCGTTCTGCAT
TTGAAATCTGATTTGGGCCACGTTCGGTATGTGATTAATCGCACTGCAAATTAAATGCGCAGGGCTGCGACGCCTCGCTGCTGCTGGATGACACCCCCACGACACCCGGCGAGAAGGGCG
CCGGCGCCAACGCCGGCGGCTCCACCTTCGGCTTCGACCTCATCGACGACATCAAGACGCAGGTCGAGGCCGCGTGCCCGGCCACCGTCTCCTGCGCCGACATCCTCGCCCTCGCCGCGC
GCGACAGCGTCAACCTGGTCAGTCCGTCTGCATTGTTCCTCTCTCTTCCCATCCCCTACTCTCACATTTTTTAGCAAAGCGACGCCACGCCATGCCTCACTCCATGTAACAACGCGACGC
AGCTCGGCGGCCCGAGCTGGGCGGTGCCGCTCGGCCGCCGCGACGCGACGTCCCCGAACGCCACGGGCGCCGCGACGGACCTCCCGGGCCCGGACTCCTCCCTCGACCGCCTCGTCGCCG
CCTTCGCCGCCAAGGGCCTCACCTCCCGCGACCTCGCCGCGCTCTCGGGCGCGCACACGGTGGGCATGGCGCGGTGCCTCAGCTTCCGCACCCGCGTCTACTGCGACGACAACGTCAGCC
CCGCCTTCGCCTCGCAGGGGCGGCAGCTCTGCCCGGCATCCGGCGGGGATGCCACCGCCGCGCCGCTCGACGCGTCCACCCCAGCCGAGTTCGACAACGGCTACTACCGGAACCTTGTCG
CCGGCGCCGGGCTGCTGCACTCCGACCAGGAGCTCTTCAACAACGGGCCGCTCGACTCGCTCGTGCGGCTCTACAGCGCCAACGGCGCCGCATTCTCGTCGGACTTCGCCGCGTCCATGG
TCAGGCTCGGGAACGTCAGCCCGCTCACGGGCTCCGCGGGGGAGATCAGGATCGACTGCAGGAAAGTGAATTCA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACGCGGCTGCTCCTCCTGATGGCGGCGGCGCTCGTCCTCCTGGTGGCGCGCGGCTCCGACGCGCAGCTCTCGGCGGGGTTCTACTCGGCGAGCTGCCCCAGCGTGCACGGC
GTCGTGCGCCAGGTCATGTCGCAGGCCGTCATGAACAACTCGCGCAGCGGCGCCGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGGCTGCGACGCCTCGCTGCTGCTGGAT
GACACCCCCACGACACCCGGCGAGAAGGGCGCCGGCGCCAACGCCGGCGGCTCCACCTTCGGCTTCGACCTCATCGACGACATCAAGACGCAGGTCGAGGCCGCGTGCCCGGCCACCGTC
TCCTGCGCCGACATCCTCGCCCTCGCCGCGCGCGACAGCGTCAACCTGCTCGGCGGCCCGAGCTGGGCGGTGCCGCTCGGCCGCCGCGACGCGACGTCCCCGAACGCCACGGGCGCCGCG
ACGGACCTCCCGGGCCCGGACTCCTCCCTCGACCGCCTCGTCGCCGCCTTCGCCGCCAAGGGCCTCACCTCCCGCGACCTCGCCGCGCTCTCGGGCGCGCACACGGTGGGCATGGCGCGG
TGCCTCAGCTTCCGCACCCGCGTCTACTGCGACGACAACGTCAGCCCCGCCTTCGCCTCGCAGGGGCGGCAGCTCTGCCCGGCATCCGGCGGGGATGCCACCGCCGCGCCGCTCGACGCG
TCCACCCCAGCCGAGTTCGACAACGGCTACTACCGGAACCTTGTCGCCGGCGCCGGGCTGCTGCACTCCGACCAGGAGCTCTTCAACAACGGGCCGCTCGACTCGCTCGTGCGGCTCTAC
AGCGCCAACGGCGCCGCATTCTCGTCGGACTTCGCCGCGTCCATGGTCAGGCTCGGGAACGTCAGCCCGCTCACGGGCTCCGCGGGGGAGATCAGGATCGACTGCAGGAAAGTGAATTCA

Retrieve as FASTA