Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
114 (310) |
PWM (Da): |
12240.97 (34114.4) |
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PI (pH):
| 4.88 (9.37) |
Peptide Signal:
| cut: 25 range:25-334 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MYWLTHGVDA DYAKNLTAKC KPGNVATVQP LDPTTPSTFD LGYYNNVYNH RALLASDALL NDSLSGAYVQ LMTNASSVDV FFADFAVSMI NMGRIGVRTG TDGEIRATCA IYVD
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (only exon 4). Incorrect prediction from phytozome (Large 5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTATTGGC TTACACATGG TGTCGACGCC GACTACGCCA AGAACCTCAC GGCGAAGTGC AAGCCGGGCA ACGTCGCCAC CGTGCAGCCG CTCGACCCCA CGACGCCCAG CACCTTCGAC
CTGGGGTACT ACAACAACGT CTACAACCAC CGGGCGCTGC TCGCCTCCGA CGCGCTGCTC AACGACAGCC TCTCCGGCGC CTACGTCCAA CTCATGACCA ACGCCTCCTC CGTCGACGTC
TTCTTCGCCG ACTTCGCCGT CTCCATGATC AACATGGGAA GGATCGGAGT GCGCACCGGC ACCGACGGCG AGATCAGGGC CACATGCGCA ATCTACGTCG AC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTATTGGC TTACACATGG TGTCGACGCC GACTACGCCA AGAACCTCAC GGCGAAGTGC AAGCCGGGCA ACGTCGCCAC CGTGCAGCCG CTCGACCCCA CGACGCCCAG CACCTTCGAC
CTGGGGTACT ACAACAACGT CTACAACCAC CGGGCGCTGC TCGCCTCCGA CGCGCTGCTC AACGACAGCC TCTCCGGCGC CTACGTCCAA CTCATGACCA ACGCCTCCTC CGTCGACGTC
TTCTTCGCCG ACTTCGCCGT CTCCATGATC AACATGGGAA GGATCGGAGT GCGCACCGGC ACCGACGGCG AGATCAGGGC CACATGCGCA ATCTACGTCG AC
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Retrieve as FASTA
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