View Redoxidase 9589

Entry information : SiPrx98 (Si022669m)

Entry ID	9589
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2011-12-12 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-12-15 (Qiang Li)

Peroxidase information: SiPrx98 (Si022669m)

Name (synonym)

SiPrx98 (Si022669m)

Class

Class III peroxidase [Orthogroup: Prx067]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx98 start..stop	S start..stop
SbPrx101	453	1.75e-161	23..319	36..332
ZmPrx[P]47	427	1.51e-151	10..304	25..317
OsPrx64	342	5.6e-118	10..307	16..325
OsPrx62	334	1.39e-114	7..301	18..326

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	228778..229746	967
join(228778..229746)

Literature and cross-references SiPrx98 (Si022669m)

DNA ref.	Phytozome 12: scaffold_3 (228778..229746)

Protein sequence: SiPrx98 (Si022669m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	323 (299)
PWM (Da):	33578.2 (31268.9)	Transmb domain:	i7-29o
PI (pH):	6.7 (6.50)	Peptide Signal:	cut: 25 range:25-323

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAATRASCVV VVLLLIIAAS NVGGLSVDFH AASCPQLEGI VRGAVQAARA QDVQVTAGLL RIFFHDCLPQ GCDASILLDG EKANGPNASL QPRALQLIEN IRAKVHAACG PTVSCADIIA LATRDAVSLA GGPSFAMPQG RTDSFRPASD DEIATLPSPF EDVGNLLGNF TSKGLADPAD LVALSGGHTV GKASCIFIRA DDDFSIRLNA TCSAGPTKKQ SLDVVTPDAF DNGYFVALRN
VHGVLHSDQG LAGHPRTAGI VRDFAANQTA FFHQFAKSMV KLGNIKGAAG EIRRNSCFRT NKARLNDGLD ILNALIDDAI VAL

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCGGCAA CAAGGGCTAG TTGTGTCGTC GTCGTCCTCC TGCTGATTAT CGCCGCCTCC AACGTCGGTG GTTTGTCCGT GGACTTCCAC GCGGCGTCGT GCCCTCAGCT TGAGGGCATC GTGCGCGGCG CCGTGCAGGC CGCGCGCGCC CAGGACGTGC AGGTCACCGC CGGCCTCCTC CGCATCTTCT TCCACGACTG CCTCCCGCAG GGGTGCGACG CCTCCATCCT GCTCGACGGC GAGAAGGCCA ACGGGCCCAA CGCCTCCCTG CAGCCCCGGG CGCTGCAGCT CATCGAGAAC ATCCGCGCCA AGGTGCACGC CGCATGCGGA CCCACCGTCT CCTGCGCCGA CATCATCGCG CTCGCAACCC GCGACGCCGT CAGCCTGGCC GGAGGCCCGT CCTTCGCCAT GCCCCAGGGC CGCACCGACA GCTTCAGGCC CGCTTCCGAC GACGAGATAG CCACCCTCCC CTCGCCCTTC GAAGACGTCG GCAATCTCCT CGGCAACTTC ACCAGCAAGG GCCTCGCCGA CCCCGCCGAC CTCGTCGCGC TCTCCGGCGG ACACACCGTC GGCAAGGCCA GCTGCATCTT CATCAGAGCG GACGATGACT TCTCCATCAG GCTCAACGCC ACCTGCTCCG CCGGCCCGAC CAAGAAGCAG AGCCTCGACG TCGTCACGCC CGACGCCTTC GACAACGGCT ACTTCGTGGC CCTCAGGAAC GTTCATGGCG TGCTCCACTC CGACCAGGGC CTCGCCGGCC ACCCGCGCAC CGCCGGCATC GTCAGGGATT TCGCCGCCAA CCAGACCGCC TTCTTCCACC AGTTTGCAAA GTCCATGGTC AAGCTCGGAA ACATCAAGGG AGCTGCAGGC GAGATACGCC GCAACAGCTG CTTCAGGACC AACAAAGCCC GCCTCAACGA TGGCCTCGAT ATCCTCAACG CCCTCATCGA CGACGCCATC
GTCGCCCTG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA