Entry information : SiPrx98 (Si022669m)
Entry ID 9589
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-12 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx98 (Si022669m)
Name (synonym) SiPrx98 (Si022669m)
Class Class III peroxidase    [Orthogroup: Prx070]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx98
start..stop
S start..stop
SbPrx101 453 2e-161 23..319 36..332
ZmPrx[P]47 427 1e-151 10..304 25..317
OsPrx64 342 5e-118 10..307 16..325
OsPrx62 334 1e-114 7..301 18..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 228778..229746 969  
join(228778..229746)


exon

Literature and cross-references SiPrx98 (Si022669m)
DNA ref. Phytozome 12:   scaffold_3 (228778..229746)
Protein sequence: SiPrx98 (Si022669m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (299)
PWM (Da):   %s   33578.2 (31268.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.7 (6.50) Peptide Signal:   %s   cut: 25 range:25-323
Sequence
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Send to Peroxiscan
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MAATRASCVV VVLLLIIAAS NVGGLSVDFH AASCPQLEGI VRGAVQAARA QDVQVTAGLL RIFFHDCLPQ GCDASILLDG EKANGPNASL QPRALQLIEN IRAKVHAACG PTVSCADIIA  LATRDAVSLA GGPSFAMPQG RTDSFRPASD DEIATLPSPF EDVGNLLGNF TSKGLADPAD LVALSGGHTV GKASCIFIRA DDDFSIRLNA TCSAGPTKKQ SLDVVTPDAF DNGYFVALRN 
VHGVLHSDQG LAGHPRTAGI VRDFAANQTA FFHQFAKSMV KLGNIKGAAG EIRRNSCFRT NKARLNDGLD ILNALIDDAI VAL 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAA CAAGGGCTAG TTGTGTCGTC GTCGTCCTCC TGCTGATTAT CGCCGCCTCC AACGTCGGTG GTTTGTCCGT GGACTTCCAC GCGGCGTCGT GCCCTCAGCT TGAGGGCATC  GTGCGCGGCG CCGTGCAGGC CGCGCGCGCC CAGGACGTGC AGGTCACCGC CGGCCTCCTC CGCATCTTCT TCCACGACTG CCTCCCGCAG GGGTGCGACG CCTCCATCCT GCTCGACGGC  GAGAAGGCCA ACGGGCCCAA CGCCTCCCTG CAGCCCCGGG CGCTGCAGCT CATCGAGAAC ATCCGCGCCA AGGTGCACGC CGCATGCGGA CCCACCGTCT CCTGCGCCGA CATCATCGCG  CTCGCAACCC GCGACGCCGT CAGCCTGGCC GGAGGCCCGT CCTTCGCCAT GCCCCAGGGC CGCACCGACA GCTTCAGGCC CGCTTCCGAC GACGAGATAG CCACCCTCCC CTCGCCCTTC  GAAGACGTCG GCAATCTCCT CGGCAACTTC ACCAGCAAGG GCCTCGCCGA CCCCGCCGAC CTCGTCGCGC TCTCCGGCGG ACACACCGTC GGCAAGGCCA GCTGCATCTT CATCAGAGCG  GACGATGACT TCTCCATCAG GCTCAACGCC ACCTGCTCCG CCGGCCCGAC CAAGAAGCAG AGCCTCGACG TCGTCACGCC CGACGCCTTC GACAACGGCT ACTTCGTGGC CCTCAGGAAC  GTTCATGGCG TGCTCCACTC CGACCAGGGC CTCGCCGGCC ACCCGCGCAC CGCCGGCATC GTCAGGGATT TCGCCGCCAA CCAGACCGCC TTCTTCCACC AGTTTGCAAA GTCCATGGTC  AAGCTCGGAA ACATCAAGGG AGCTGCAGGC GAGATACGCC GCAACAGCTG CTTCAGGACC AACAAAGCCC GCCTCAACGA TGGCCTCGAT ATCCTCAACG CCCTCATCGA CGACGCCATC 
GTCGCCCTG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAA CAAGGGCTAG TTGTGTCGTC GTCGTCCTCC TGCTGATTAT CGCCGCCTCC AACGTCGGTG GTTTGTCCGT GGACTTCCAC GCGGCGTCGT GCCCTCAGCT TGAGGGCATC  GTGCGCGGCG CCGTGCAGGC CGCGCGCGCC CAGGACGTGC AGGTCACCGC CGGCCTCCTC CGCATCTTCT TCCACGACTG CCTCCCGCAG GGGTGCGACG CCTCCATCCT GCTCGACGGC  GAGAAGGCCA ACGGGCCCAA CGCCTCCCTG CAGCCCCGGG CGCTGCAGCT CATCGAGAAC ATCCGCGCCA AGGTGCACGC CGCATGCGGA CCCACCGTCT CCTGCGCCGA CATCATCGCG  CTCGCAACCC GCGACGCCGT CAGCCTGGCC GGAGGCCCGT CCTTCGCCAT GCCCCAGGGC CGCACCGACA GCTTCAGGCC CGCTTCCGAC GACGAGATAG CCACCCTCCC CTCGCCCTTC  GAAGACGTCG GCAATCTCCT CGGCAACTTC ACCAGCAAGG GCCTCGCCGA CCCCGCCGAC CTCGTCGCGC TCTCCGGCGG ACACACCGTC GGCAAGGCCA GCTGCATCTT CATCAGAGCG  GACGATGACT TCTCCATCAG GCTCAACGCC ACCTGCTCCG CCGGCCCGAC CAAGAAGCAG AGCCTCGACG TCGTCACGCC CGACGCCTTC GACAACGGCT ACTTCGTGGC CCTCAGGAAC  GTTCATGGCG TGCTCCACTC CGACCAGGGC CTCGCCGGCC ACCCGCGCAC CGCCGGCATC GTCAGGGATT TCGCCGCCAA CCAGACCGCC TTCTTCCACC AGTTTGCAAA GTCCATGGTC  AAGCTCGGAA ACATCAAGGG AGCTGCAGGC GAGATACGCC GCAACAGCTG CTTCAGGACC AACAAAGCCC GCCTCAACGA TGGCCTCGAT ATCCTCAACG CCCTCATCGA CGACGCCATC 
GTCGCCCTG 

Retrieve as FASTA