Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
216 |
PWM (Da): |
23819.1 |
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PI (pH):
| 9.44 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
RAMQLIEDTR ITVHAQCGPT VSCADILALA TRRAVVRAGG *TFPVRLGRY DNVAPATHRD VAAIPLPNTS DADKLLAAFA SRGLTDLVAL SGAHSIGKAH CPSFRDRAAL YDDDFTRKLF
RDCTAGGTRT WWRxLDGVTP RALDSQYYRN LLYRGEGVLT SDVALLSHPL TAMSVRYYND HPQEFLNHFS SKMDKLYNVP RPGFGEIRRF SCFRTNN
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (Gaps and stop in frame; 5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CGGGCGATGC AGCTGATCGA GGACACCCGC ATCACCGTGC ACGCACAGTG CGGGCCCACC GTGTCCTGCG CCGACATCCT GGCCCTCGCC ACCCGCCGCG CCGTCGTCCG CGCAGGCGGC
TGAACCTTCC CCGTCCGCCT CGGCCGCTAT GACAACGTCG CGCCGGCGAC CCACCGCGAC GTCGCCGCCA TCCCGCTGCC GAACACCAGC GACGCCGACA AGCTCCTCGC CGCCTTCGCC
AGCCGGGGCC TCACCGACCT CGTCGCGCTC TCCGGCGCGC ACTCCATCGG CAAGGCACAC TGCCCGTCGT TCCGCGACCG GGCGGCGCTG TACGACGACG ACTTCACCAG GAAGCTCTTC
AGGGACTGCA CTGCAGGAGG GACGCGTACA TGGTGGAGGA CnCTCGACGG CGTCACGCCG CGGGCGCTCG ACAGCCAGTA CTACAGGAAC CTGCTGTACA GGGGCGAGGG GGTGCTGACA
TCCGACGTGG CGCTGCTGAG TCACCCGTTG ACTGCCATGT CGGTGAGGTA CTACAACGAT CACCCGCAGG AGTTCCTCAA CCATTTCTCG TCCAAGATGG ACAAGCTCTA CAATGTGCCC
CGCCCCGGGT TCGGCGAGAT CCGACGGTTC AGCTGCTTCA GGACCAACAA T
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CGGGCGATGC AGCTGATCGA GGACACCCGC ATCACCGTGC ACGCACAGTG CGGGCCCACC GTGTCCTGCG CCGACATCCT GGCCCTCGCC ACCCGCCGCG CCGTCGTCCG CGCAGGCGGC
TGAACCTTCC CCGTCCGCCT CGGCCGCTAT GACAACGTCG CGCCGGCGAC CCACCGCGAC GTCGCCGCCA TCCCGCTGCC GAACACCAGC GACGCCGACA AGCTCCTCGC CGCCTTCGCC
AGCCGGGGCC TCACCGACCT CGTCGCGCTC TCCGGCGCGC ACTCCATCGG CAAGGCACAC TGCCCGTCGT TCCGCGACCG GGCGGCGCTG TACGACGACG ACTTCACCAG GAAGCTCTTC
AGGGACTGCA CTGCAGGAGG GACGCGTACA TGGTGGAGGA CnCTCGACGG CGTCACGCCG CGGGCGCTCG ACAGCCAGTA CTACAGGAAC CTGCTGTACA GGGGCGAGGG GGTGCTGACA
TCCGACGTGG CGCTGCTGAG TCACCCGTTG ACTGCCATGT CGGTGAGGTA CTACAACGAT CACCCGCAGG AGTTCCTCAA CCATTTCTCG TCCAAGATGG ACAAGCTCTA CAATGTGCCC
CGCCCCGGGT TCGGCGAGAT CCGACGGTTC AGCTGCTTCA GGACCAACAA T
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Retrieve as FASTA
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