Entry information : PsoLiP03 (ylpB / YK-LiP1 / PsoLiPC)
Entry ID 9633
Creation 2011-10-25 (Christophe Dunand)
Last sequence changes 2011-10-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-10-25 (Christophe Dunand)
Peroxidase information: PsoLiP03 (ylpB / YK-LiP1 / PsoLiPC)
Name (synonym) PsoLiP03 (ylpB / YK-LiP1 / PsoLiPC)
Class Lignin peroxidase    [Orthogroup: LiP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete sordida    [TaxId: 48140 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsoLiP03
start..stop
S start..stop
PcLiP03_BKMF1767 671 0 1..372 1..371
PcLiP03_RP78 665 0 1..372 1..372
PsoLiP07 639 0 1..372 1..373
PcarLiPC 619 0 1..372 1..371
Literature and cross-references PsoLiP03 (ylpB / YK-LiP1 / PsoLiPC)
Literature Sugiura,T., Yamagishi,K., Kimura,T., Nishida,T., Kawagishi,H. and
Hirai,H. Cloning and homologous expression of novel lignin peroxidase genes in the white-rot fungus Phanerochaete sordida YK-624. Biosci. Biotechnol. Biochem. 73 (8), 1793-1798 (2009)
mRNA ref. GenBank:   AB455007.1
Protein sequence: PsoLiP03 (ylpB / YK-LiP1 / PsoLiPC)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372 (351)
PWM (Da):   %s   39135.18 (37024.0)  
PI (pH):   %s   4.18 (4.09) Peptide Signal:   %s   cut: 22 range:22-372
Sequence
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Send to Peroxiscan
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MAFKRLLAVL TAAISLGAVQ GVAVEKRATC SNGKTVSASS CCAWFNVLSD IQENLFNGGQ CGAEAHESIR LVFHDSIAIS PAMEAAGQFG GGGADGSIMI FDEIETNFHP NIGLDEIVRL  QKPFVQKHGV TPGDFIAFAG AVALSNCPGA PQMNFFTGRA PATQAAPDGL VPEPFHTVDQ IIDRVGDAGE FDELELVWML SAHSIAAAND VDPTTQGLPF DSTPGIFDSQ FFVETQLAGT  GFPASANNQG EVTSPLAGEM RLQSDFLIAR DARTACEWQS FVNNQSKLVS DFQFIFLALT QLGQDPTVMT DCSDVIPISK PAPANTPGFS FFPAGKTMAD VEQACAETPF PTLSTLPGPQ 
TSVARIQPPP GA 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCA AGAGGCTCCT CGCTGTTCTC ACCGCCGCCA TCTCCCTCGG CGCCGTCCAG GGTGTCGCTG TTGAGAAGCG CGCCACCTGC TCCAACGGCA AGACGGTCAG CGCGTCGTCG  TGCTGCGCCT GGTTCAATGT CCTCTCGGAC ATCCAGGAGA ACCTCTTCAA CGGCGGCCAG TGCGGCGCTG AGGCCCATGA GTCCATCCGC CTTGTCTTCC ACGACTCCAT CGCCATCTCG  CCTGCTATGG AGGCCGCTGG TCAGTTTGGC GGCGGCGGTG CTGACGGCTC CATCATGATC TTCGACGAGA TCGAGACCAA CTTCCACCCC AACATCGGCC TCGACGAGAT CGTGCGCCTG  CAGAAGCCCT TCGTCCAGAA GCACGGCGTC ACCCCCGGCG ACTTCATCGC CTTCGCTGGC GCGGTTGCCC TGTCCAACTG CCCCGGTGCC CCGCAGATGA ACTTCTTCAC CGGCCGTGCT  CCCGCCACCC AGGCCGCCCC CGATGGTCTT GTCCCCGAGC CCTTCCACAC TGTCGACCAG ATTATCGACC GTGTCGGCGA CGCCGGCGAG TTCGATGAGC TCGAGCTCGT CTGGATGCTT  TCCGCCCATT CCATTGCGGC TGCGAACGAC GTCGACCCGA CCACCCAGGG TCTTCCCTTC GACTCCACCC CGGGTATCTT CGACTCGCAG TTCTTCGTCG AGACCCAGCT CGCCGGCACT  GGCTTCCCCG CCTCCGCGAA CAACCAGGGC GAGGTCACGT CCCCGCTTGC GGGCGAGATG CGCCTGCAGT CCGACTTCCT CATCGCCCGC GACGCGCGCA CCGCATGCGA GTGGCAGTCC  TTCGTCAACA ACCAGTCGAA GCTCGTGTCC GACTTCCAGT TCATCTTCCT CGCCCTCACG CAGCTCGGCC AGGACCCGAC CGTCATGACC GACTGCTCGG ACGTTATTCC CATCTCCAAG  CCCGCGCCCG CGAACACCCC CGGATTCTCT TTCTTCCCCG CCGGCAAGAC CATGGCTGAC GTCGAGCAGG CTTGCGCCGA GACGCCCTTC CCGACTCTCT CGACCCTCCC CGGCCCGCAA 
ACCTCGGTCG CTCGCATCCA ACCCCCTCCC GGTGCTTAA 

Retrieve as FASTA