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Entry information : PbreMnP04 (MnP4-long)
Entry ID 9640
Creation 2011-11-01 (Christophe Dunand)
Last sequence changes 2011-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-28 (Catherine Mathe (Scipio))
Peroxidase information: PbreMnP04 (MnP4-long)
Name (synonym) PbreMnP04 (MnP4-long)
Class Manganese peroxidase    [Orthogroup: MnP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phlebia
Organism Phlebia brevispora    [TaxId: 194682 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbreMnP04
start..stop		 S start..stop
PbreMnP03 704 0 1..383 1..383
PbreMnP01 704 0 1..381 1..381
PbreMnP07 691 0 1..383 1..383
PbreMnP05 649 0 1..381 1..381
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9640' 'join(33..158,219..270,330..356,424..463,521..698,764..985,1046..1093,1150..1303,1372..1507,1571..1647,1706..1797)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 33..158 124 N° 2 219..270 50 N° 3 330..356 25 N° 4 424..463 38
N° 5 521..698 176 N° 6 764..985 220 N° 7 1046..1093 46 N° 8 1150..1303 152
N° 9 1372..1507 134 N° 10 1571..1647 75 N° 11 1706..1797 90  
join(33..158,219..270,330..356,424..463,521..698,764..985,1046..1093,1150..1303, 1372..1507,1571..1647,1706..1797)


exon

Literature and cross-references PbreMnP04 (MnP4-long)
DNA ref. JGI genome:   scaffold_1398 (33..1797)
Protein sequence: PbreMnP04 (MnP4-long)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   383 (365)
PWM (Da):   %s   40337.99 (38501.0)  
PI (pH):   %s   4.31 (4.31) Peptide Signal:   %s   cut: 19 range:19-383
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFTSLLALVALVAYTTASPARTVACADGTRVTNEACCAFIPLAQDLQNTIFQNDCGEDTHEVIRLTFHDAVAISRSQGPKAGGGADGSMLLFPLVEPEFSANNGIDDSVNNLIPFMARHPTISAGDIVQFAGAVALSNCGAPQLEFLAGRPNKTIAAIEGL
IPEPQDSVTKILERFEDAGGFTPFEVVSLLASHSVARADKVDETIDAAPFDSTPFTFDSQVFLEVLLKGTGFPGTGNNTGEVASPLPLGSGSDTGEIRLQSDFALARDERTACFWQSFVN
EQEFMAQSFKAAMAKLAVLGHNRDDLIDCSDVVPVPKPAVKKPTTFPATKNSKDLELTCTALRFPTLTTPGATETLIPHCSDGAMNCTTVQFTGPATAS

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCACTTCGCTACTCGCACTCGTCGCTCTAGTGGCGTACACCACTGCCTCGCCTGCCCGCACCGTTGCCTGCGCTGACGGCACTCGCGTTACCAACGAGGCATGCTGTGCCTTC
ATTCCTCTGTATGCAACTCTGCCAACATCAGCTCTGTTCAACTTTCTGACCGGCCCACCCTCTTTCAGCTTGCCCAGGATCTCCAGAACACCATATTCCAGAATGATTGTGGTGAAGATA
TAGTGAGTTTTCATTCGACGCATATAAGTGGCGATGGCGGTGCTGATGAGTGTTTTTGTAGCACACGAGGTCATTCGGTTGACGTTCCCCGTAAGTTTCTAGTATTTCGAGATCGCAATG
TTTTGGAGGAATGCTGATGCTATTGTAACACCACCAGATGACGCCGTCGCTATCAGTCGAAGCCAAGGTCCTAAAGCGCGTAAGTTTTTATATAAACCTGATCAACATATTTTGACTGAA
GGATTTGCTCGGATAGCGGTGGAGGCGCCGACGGCTCTATGCTCCTGTTCCCCCTCGTCGAGCCTGAGTTCTCCGCTAACAACGGTATCGACGACAGCGTCAACAACTTGATCCCTTTCA
TGGCCAGGCACCCAACGATCAGTGCTGGTGACATCGTCCAGTTCGCCGGTGCGGTTGCGCTCAGCAACTGCCCGCGGTAAGCCCGTTTCCTGTCCTTGACGTTTTCAAGTTTGTTCCGCT
GACGTGCTACTATCGCTTCAGGGCGCACCGCAACTTGAGTTCCTCGCTGGCCGCCCGAACAAGACGATTGCAGCGATCGAAGGCTTGATCCCCGAGCCCCAGGACAGCGTGACGAAGATT
CTCGAGCGCTTTGAGGATGCAGGTGGCTTCACGCCGTTCGAGGTTGTCTCGCTACTGGCTTCGCACAGTGTCGCGCGTGCAGACAAGGTCGATGAGACGATCGACGCTGCACCCTTCGAT
TCGCGGTTAGTCGATTGTACCACATTTTGGGAACCAGAGACTGATGACATATGTGGAATTTTAAGACTCCCTTCACGTTCGACAGCCAGGTCTTCCTTGAGGTCCTGCTCAAGAGGTGAG
CAACCATCGCATATGGCATCGAGAAGTACGCACAGATTCAAATGCGCACAGGGCACCGGATTCCCTGGGACGGGCAATAACACTGGAGAAGTTGCGTCTCCTCTACCTCTCGGCTCCGGC
TCCGACACTGGCGAAATACGTCTTCAGTCCGACTTTGCTCTCGCTCGCGATGAGCGCACGGCCTGCTTCTGGCAAAGTTTCGTCACAGTGCGTGCTAATGGTTCTCGTCTTTATTCATAT
GACGTTACTTACTTTACCCCTTGCCATCTGCGCAGACGAGCAAGAGTTCATGGCACAGAGCTTCAAGGCCGCCATGGCGAAGCTGGCTGTCCTCGGCCACAACAGGGATGATCTGATCGA
TTGCTCTGATGTTGTCCCTGTGCCTAAGCCCGCAGTTAAGAAGCCTACGACACGTGAGTGTGGACCTTGTGTCTGGCATAGAATACTTTGCTGACTCAAACGTACCATGGATATAGCTTC
CCGGCCACCAAGAATTCCAAGGATCTCGAGCTCACCTGCACCGCTTTGAGGTTCCCCACGCTCACCACTGACCCCGTAAGTTTACATATGGCTGCTTCAAATACCCTCAAGACTAATAGC
GAACTTTTCGTAGCTGGTGCTACTGAGACCCTCATTCCTCACTGCTCTGACGGTGCCATGAACTGCACTACCGTGCAGTTCACCGGCCCCGCCACCGCCAGCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCACTTCGCTACTCGCACTCGTCGCTCTAGTGGCGTACACCACTGCCTCGCCTGCCCGCACCGTTGCCTGCGCTGACGGCACTCGCGTTACCAACGAGGCATGCTGTGCCTTC
ATTCCTCTTGCCCAGGATCTCCAGAACACCATATTCCAGAATGATTGTGGTGAAGATACACACGAGGTCATTCGGTTGACGTTCCATGACGCCGTCGCTATCAGTCGAAGCCAAGGTCCT
AAAGCCGGTGGAGGCGCCGACGGCTCTATGCTCCTGTTCCCCCTCGTCGAGCCTGAGTTCTCCGCTAACAACGGTATCGACGACAGCGTCAACAACTTGATCCCTTTCATGGCCAGGCAC
CCAACGATCAGTGCTGGTGACATCGTCCAGTTCGCCGGTGCGGTTGCGCTCAGCAACTGCCCGGGCGCACCGCAACTTGAGTTCCTCGCTGGCCGCCCGAACAAGACGATTGCAGCGATC
GAAGGCTTGATCCCCGAGCCCCAGGACAGCGTGACGAAGATTCTCGAGCGCTTTGAGGATGCAGGTGGCTTCACGCCGTTCGAGGTTGTCTCGCTACTGGCTTCGCACAGTGTCGCGCGT
GCAGACAAGGTCGATGAGACGATCGACGCTGCACCCTTCGATTCGACTCCCTTCACGTTCGACAGCCAGGTCTTCCTTGAGGTCCTGCTCAAGGGCACCGGATTCCCTGGGACGGGCAAT
AACACTGGAGAAGTTGCGTCTCCTCTACCTCTCGGCTCCGGCTCCGACACTGGCGAAATACGTCTTCAGTCCGACTTTGCTCTCGCTCGCGATGAGCGCACGGCCTGCTTCTGGCAAAGT
TTCGTCAACGAGCAAGAGTTCATGGCACAGAGCTTCAAGGCCGCCATGGCGAAGCTGGCTGTCCTCGGCCACAACAGGGATGATCTGATCGATTGCTCTGATGTTGTCCCTGTGCCTAAG
CCCGCAGTTAAGAAGCCTACGACCTTCCCGGCCACCAAGAATTCCAAGGATCTCGAGCTCACCTGCACCGCTTTGAGGTTCCCCACGCTCACCACTGACCCTGGTGCTACTGAGACCCTC
ATTCCTCACTGCTCTGACGGTGCCATGAACTGCACTACCGTGCAGTTCACCGGCCCCGCCACCGCCAGCTAG

Retrieve as FASTA