1. Browse the Database
  2. View Redoxidase
Entry information : PbreMnP07 (MnP7-long / MnP2-long)
Entry ID 9643
Creation 2011-11-01 (Christophe Dunand)
Last sequence changes 2012-12-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-12-04 (Christophe Dunand)
Peroxidase information: PbreMnP07 (MnP7-long / MnP2-long)
Name (synonym) PbreMnP07 (MnP7-long / MnP2-long)
Class Manganese peroxidase    [Orthogroup: MnP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phlebia
Organism Phlebia brevispora    [TaxId: 194682 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbreMnP07
start..stop		 S start..stop
PbreMnP03 744 0 1..384 1..384
PbreMnP04 691 0 1..383 1..383
PbreMnP01 677 0 1..383 1..383
PbreMnP05 644 0 1..382 1..382
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9643' 'join(2198693..2198818,2198880..2198931,2198993..2199019,2199076..2199115,2199173..2199350,2199412..2199633,2199694..2199741,2199801..2199954,2200012..2200147,2200203..2200279,2200335..2200429)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2198693..2198818 124 N° 2 2198880..2198931 50 N° 3 2198993..2199019 25 N° 4 2199076..2199115 38
N° 5 2199173..2199350 176 N° 6 2199412..2199633 220 N° 7 2199694..2199741 46 N° 8 2199801..2199954 152
N° 9 2200012..2200147 134 N° 10 2200203..2200279 75 N° 11 2200335..2200429 93  
join(2198693..2198818,2198880..2198931,2198993..2199019,2199076..2199115,2199173 ..2199350,2199412..2199633,2199694..2199741,2199801..2199954,2200012..2200147,22 00203..2200279,2200335..2200429)


exon

Literature and cross-references PbreMnP07 (MnP7-long / MnP2-long)
DNA ref. JGI genome:   scaffold_553 (1949..3212) [5' end]  scaffold_2 (2199841..2200430) [3' end]
Protein sequence: PbreMnP07 (MnP7-long / MnP2-long)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   384 (366)
PWM (Da):   %s   40208.83 (38367.9)  
PI (pH):   %s   4.08 (4.08) Peptide Signal:   %s   cut: 19 range:19-384
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFTSLFALVALVAYTAASPAPAAVCSDGTRVSNEACCAFIPLAQDLQSEVLQNDCGEDAHEIIRLTFHDAIAISRSKGPSAGGGADGSMLLFPLVEPEFVANNGISDSVNNLIPFLAKHPTISAGDLVQFAGAVALTNCGAPQLEFLAGRPNKTIPAIDGL
IPEPQDSVTSILERFDDAGGFTPFEVVSLLASHSIARADKVDETIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGTDNNTGEVASPLPLTSGTDTGELRLQSDFALARDERTACFWQSFVN
EEEFMATSFKNAMAKLAVLGHNTNDLIDCSDVVPAPKAAVKKPATFPATKNASDLELTCTALRFPTLTTPGATETLIPHCSDGNMTCVTVQFDGPATDSS

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns). Sequence has bee reconstructed from scaffold_2 (short 3'end due to undetermined sequence) and scaffold_553 (5' end => BAC end). Overlap between the two scaffold
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTTACTTCGCTCTTCGCACTCGTCGCTTTAGTAGCGTACACCGCTGCCTCACCCGCACCCGCTGCCGTCTGCTCTGACGGCACTCGCGTCTCCAACGAGGCTTGCTGCGCTTTC
ATTCCTCTGTACGTAATGCAGCCGACGTCGATGTCGTCCACTTGGTCTAACCTAGATGCTTCCTCTCAGCTCGCCCAGGATCTCCAGTCAGAAGTCCTCCAGAACGATTGCGGTGAAGAT
GTGGTAAGGAGGATCGCTTAGGGTGCATTATTCTCTGCCAGTGTGCTGAATACTACATCCCTAGCCCACGAAATCATTCGGTTGACTTTCCCCGTAAGTCTACTCACAAATCGAAGTTGC
ACGAGCTAACGCCAATCTACCACGTCCAGATGATGCCATCGCCATCAGTCGAAGCAAGGGCCCATCTGCGCGTGAGTACTTTGTGTGCCTCATCAGTACATGTTCACTGAAGCAGCTACG
ATGAATAGCGGCGGAGGTGCCGACGGCTCCATGCTCCTCTTCCCCCTCGTCGAGCCTGAGTTCGTGGCCAACAACGGTATCTCCGACAGCGTCAACAATCTGATCCCCTTCCTGGCCAAG
CACCCGACGATCAGCGCTGGTGACCTCGTTCAGTTCGCCGGCGCCGTAGCGCTGACCAACTGCCCCCCGTAAGCGCCATTGCTATTCTTGATACTCCTTCGTTGTGCTAATGCACATTGG
TGACGGTAGGGAGCGCCGCAGCTCGAATTCCTGGCTGGCCGCCCGAACAAGACGATCCCAGCCATCGATGGCCTGATTCCCGAGCCTCAGGACAGCGTGACCAGTATTCTCGAGCGCTTT
GACGATGCAGGTGGCTTCACGCCCTTCGAGGTTGTTTCTTTGTTGGCTTCCCACAGCATCGCGCGTGCCGATAAGGTCGATGAAACGATTGATGCCGCGCCCTTCGATTCGCGGTCGGTT
CAGCATGCTCCTCATTTGATCTCAAACTGACGTCATTTGCCGAACTTTAACAGACTCCCTTCACGTTTGACACCCAGGTCTTCCTTGAAGTTCTGCTCAAGAGGTAAAGTACTATTACGT
GTGACATCGGAAATCGTACGTTAATCATCATGCACATTTCAGGGTGTCGGGTTCCCTGGAACGGATAACAACACTGGCGAGGTTGCGTCTCCGCTCCCTCTGACCAGCGGCACCGACACT
GGCGAGTTGCGTCTCCAGTCCGACTTCGCTCTCGCTCGTGACGAACGCACTGCCTGCTTCTGGCAGAGTTTCGTCACAGTACGTGTCATCCCCCCTTCTTTGTCTGCCTCACATTACTCA
CGCAACATCTTCCAGACGAGGAGGAGTTCATGGCTACGAGCTTCAAGAACGCCATGGCGAAGTTGGCTGTCCTCGGCCACAACACGAACGACCTGATTGACTGCTCTGACGTCGTCCCCG
CGCCCAAGGCCGCTGTCAAGAAGCCGGCCACACGTAAGTAATATTGTTAAAGGCAAGCTTAAAGCTGCGTGATTGACCACAAACATAGATTCCCGGCCACCAAGAACGCCAGTGACCTTG
AGCTGACCTGCACTGCCTTGAGGTTCCCCACGCTCACCACTGATCTCGTAAGTTTTCTCATTGCTGCATCAGTCTTCTTCGTGATCATTGACTCTTTCACAGCTGGTGCCACCGAGACCC
TCATCCCTCACTGCTCTGACGGCAACATGACCTGTGTTACTGTGCAGTTCGACGGCCCCGCCACGGACTCCTCGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTTACTTCGCTCTTCGCACTCGTCGCTTTAGTAGCGTACACCGCTGCCTCACCCGCACCCGCTGCCGTCTGCTCTGACGGCACTCGCGTCTCCAACGAGGCTTGCTGCGCTTTC
ATTCCTCTCGCCCAGGATCTCCAGTCAGAAGTCCTCCAGAACGATTGCGGTGAAGATGCCCACGAAATCATTCGGTTGACTTTCCATGATGCCATCGCCATCAGTCGAAGCAAGGGCCCA
TCTGCCGGCGGAGGTGCCGACGGCTCCATGCTCCTCTTCCCCCTCGTCGAGCCTGAGTTCGTGGCCAACAACGGTATCTCCGACAGCGTCAACAATCTGATCCCCTTCCTGGCCAAGCAC
CCGACGATCAGCGCTGGTGACCTCGTTCAGTTCGCCGGCGCCGTAGCGCTGACCAACTGCCCCGGAGCGCCGCAGCTCGAATTCCTGGCTGGCCGCCCGAACAAGACGATCCCAGCCATC
GATGGCCTGATTCCCGAGCCTCAGGACAGCGTGACCAGTATTCTCGAGCGCTTTGACGATGCAGGTGGCTTCACGCCCTTCGAGGTTGTTTCTTTGTTGGCTTCCCACAGCATCGCGCGT
GCCGATAAGGTCGATGAAACGATTGATGCCGCGCCCTTCGATTCGACTCCCTTCACGTTTGACACCCAGGTCTTCCTTGAAGTTCTGCTCAAGGGTGTCGGGTTCCCTGGAACGGATAAC
AACACTGGCGAGGTTGCGTCTCCGCTCCCTCTGACCAGCGGCACCGACACTGGCGAGTTGCGTCTCCAGTCCGACTTCGCTCTCGCTCGTGACGAACGCACTGCCTGCTTCTGGCAGAGT
TTCGTCAACGAGGAGGAGTTCATGGCTACGAGCTTCAAGAACGCCATGGCGAAGTTGGCTGTCCTCGGCCACAACACGAACGACCTGATTGACTGCTCTGACGTCGTCCCCGCGCCCAAG
GCCGCTGTCAAGAAGCCGGCCACATTCCCGGCCACCAAGAACGCCAGTGACCTTGAGCTGACCTGCACTGCCTTGAGGTTCCCCACGCTCACCACTGATCCTGGTGCCACCGAGACCCTC
ATCCCTCACTGCTCTGACGGCAACATGACCTGTGTTACTGTGCAGTTCGACGGCCCCGCCACGGACTCCTCGTGA

Retrieve as FASTA