Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
298 |
PWM (Da): |
32364.18 |
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PI (pH):
| 5.32 |
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Sequence 345
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AFAPLCLCNLNPQFYDNSCPQAQPIVNSILTLYVVIQPGYATQILRLHFRDCFVMGCDGLLLLDSSESIVSEKESNPNCDSARGFIVIHAIKLALERACPSIVS*ADILTIAARDSVVLTSGTS*EVPLGRIDS*EASISGSNNNIPVPNITFQTLQTKFEQ*GFNLTDLVARSGTHTIGIARCTNFM*RLYNQSGNGEPGSTLDQNYSALLRPTCPRxTLGDQNPFFIDYATPLKYWxNSYFKNLKENKGLLNSGQLLFTMNQE*TELVRLNAEGNGLFFEQFSKSMIKMGNISPLTNSSGEI |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome. 5' end and 3' end are missing. Stops in frame. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGCTCCCTTGTGCCTCTGTAACCTTAATCCTCAGTTTTATGACAATTCATGCCCTCAAGCTCAGCCAATTGTGAATTCCATTCTTACCTTGTATGTTGTAATTCAACCCGGATATGCAAC TCAAATTCTCAGGCTTCATTTTCGTGATTGTTTTGTCATGGTCTCTCCCTATGACTTGCCAACAAACTTAGTGGTTTATTGCACAACAACATCACATTATTAACATTGTAATATCATAAA TAATTATACGATGTTAGTACTTAGTCTTATTGGTAACATAGTTGCATTATCATGTGATCAATGTTAATGCATAGTACTTAGTCTTATTAGTAAACATATAATAGTTAATTATGTTATATC CAGTAGTTCTTTATTCAAATGCTTAATTCAAGGTTGATGTAGTAGGGTTGTGATGGTTTGTTGTTGTTAGATAGCAGTGAAAGCATTGTCAGTGAGAAGGAATCAAATCCCAACTGTGAT TCAGCTAGAGGATTTATAGTCATTCATGCAATTAAACTGGCACTAGAGAGAGCATGCCCTTCTATAGTGTCTTGAGCTGACATCTTGACTATTGCTGCAAGGGATTCAGTTGTTCTTGTA AGCATCTGCTTATGAGAGATTTAGTTAATTGGTTTGAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATACTATAAAAGTTTGTGCATGAAATAGTAAAATAAGTTTAATTTTTT TCCTATTTTCCATACAAACAAAAAATAAAGTAAAACAAAATGATATTTTTGTAATTAAAAGTGGAAATAAAAAATAAAAAATAGAAAATTTTTTGTCAAATTAAACTGTTTGTAATTAAC CTTTCACTATCAAAACTTTTTCATTTTTATCAAGCCTAATTCACTATATATCCCTTTTATGTATAGACTAGTGGAACAAGCTAGGAAGTACCCTTAGGAAGAATTGACTCTTGAGAAGCA AGCATAAGTGGCTCCAACAACAACATTCCAGTCCCAAATATCACATTCCAAACCCTCCAAACAAAATTCGAGCAATAGGGGTTTAACCTTACTGATCTAGTTGCTCGATCTATTTGGTAT ACTCCTTAAACTTGTCTATTTCGAATTCTATTTAGATAAATTTTTCTAAAAATACTTATAAAAGAAAAGGAATGAGAAAAAAATAAAAGAGAAATTCCACATGTTGTCATGCATAAACTT GAGTCAAAGTTATCTCAATGTCATTTTCTAAACAATTTTTGTACAAATGCTACATATAGGGACCCATACTATAGGAATTGCTAGGTGCACCAACTTCATGTAAAGACTCTACAACCAAAG TGGAAATGGCGAGCCAGGCTCCACTCTTGACCAAAACTATTCTGCTTTGTTGCGTCCTACGTGTCCAAGGNNNACTTTGGGTGACCAGAATCCATTCTTCATAGACTACGCCACACCACT TAAATATTGGCNNAATAGCTACTTTAAGAACCTGAAGGAAAACAAGGGTCTATTAAATTCTGGTCAACTTCTCTTCACAATGAATCAAGAATGAACTGAGTTAGTGAGGTTGAATGCTGA AGGAAACGGCCTTTTCTTTGAACAATTCTCCAAGTCCATGATCAAGATGGGAAACATTTCTCCTTTGACGAATTCTAGTGGAGAGATC |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGCTCCCTTGTGCCTCTGTAACCTTAATCCTCAGTTTTATGACAATTCATGCCCTCAAGCTCAGCCAATTGTGAATTCCATTCTTACCTTGTATGTTGTAATTCAACCCGGATATGCAAC TCAAATTCTCAGGCTTCATTTTCGTGATTGTTTTGTCATGGTCTCTGATGGTTTGTTGTTGTTAGATAGCAGTGAAAGCATTGTCAGTGAGAAGGAATCAAATCCCAACTGTGATTCAGC TAGAGGATTTATAGTCATTCATGCAATTAAACTGGCACTAGAGAGAGCATGCCCTTCTATAGTGTCTTGAGCTGACATCTTGACTATTGCTGCAAGGGATTCAGTTGTTCTTGTAAGTGG AACAAGCTAGGAAGTACCCTTAGGAAGAATTGACTCTTGAGAAGCAAGCATAAGTGGCTCCAACAACAACATTCCAGTCCCAAATATCACATTCCAAACCCTCCAAACAAAATTCGAGCA ATAGGGGTTTAACCTTACTGATCTAGTTGCTCGATCTATTTGCCATACTATAGGAATTGCTAGGTGCACCAACTTCATGTAAAGACTCTACAACCAAAGTGGAAATGGCGAGCCAGGCTC CACTCTTGACCAAAACTATTCTGCTTTGTTGCGTCCTACGTGTCCAAGGNNNACTTTGGGTGACCAGAATCCATTCTTCATAGACTACGCCACACCACTTAAATATTGGCNNAATAGCTA CTTTAAGAACCTGAAGGAAAACAAGGGTCTATTAAATTCTGGTCAACTTCTCTTCACAATGAATCAAGAATGAACTGAGTTAGTGAGGTTGAATGCTGAAGGAAACGGCCTTTTCTTTGA ACAATTCTCCAAGTCCATGATCAAGATGGGAAACATTTCTCCTTTGACGAATTCTAGTGGAGAGATC |
Retrieve as FASTA
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