Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
80 |
PWM (Da): |
8255.2 |
Transmb domain: |
i41-63o |
PI (pH):
| 5.54 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
SAGTFDKGTN TSGPFGHRY* AFGATQGGVP YFELRRFLPG DVFxVFGVCA LNVVFVLTQL AGVVAVEVTG GPEVPFHPER E
|
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic. No prediction from phytozome. Just short part sequence with Stop in frame. |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCTGCTGGAA CCTTTGACAA GGGCACAAAC ACTAGTGGAC CCTTCGGACA TCGCTATTAG GCTTTTGGAG CCACTCAAGG TGGAGTTCCC TATTTTGAGC TACGCCGATT TCTACCCGGT
GATGTTTTTT TnGTCTTTGG TGTTTGTGCA CTTAATGTTG TGTTTGTGTT GACGCAGTTG GCTGGCGTTG TTGCCGTTGA GGTCACGGGT GGACCTGAAG TTCCATTCCA CCCTGAAAGA
GAG
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCTGCTGGAA CCTTTGACAA GGGCACAAAC ACTAGTGGAC CCTTCGGACA TCGCTATTAG GCTTTTGGAG CCACTCAAGG TGGAGTTCCC TATTTTGAGC TACGCCGATT TCTACCCGGT
GATGTTTTTT TnGTCTTTGG TGTTTGTGCA CTTAATGTTG TGTTTGTGTT GACGCAGTTG GCTGGCGTTG TTGCCGTTGA GGTCACGGGT GGACCTGAAG TTCCATTCCA CCCTGAAAGA
GAG
|
Retrieve as FASTA
|
|