View Redoxidase 9682

Entry information : CparGPx01

Entry ID	9682
Creation	2011-11-11 (Passaia GisÃ¨le)
Last sequence changes	2011-11-11 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2012-04-23 (Catherine Mathe (Scipio))

Peroxidase information: CparGPx01

Name

CparGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Sordariomycetes Cryphonectriaceae Cryphonectria

Organism

Cryphonectria parasitica [TaxId: 5116 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

Oxidative stress

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CparGPx01 start..stop	S start..stop
CgraGPx01	295	2.39e-103	1..168	69..236
ChigGPx01	295	2.54e-103	1..168	73..240
CfioGPx01_MH18	294	5.13e-103	1..165	74..238
CgloGPx01_ST23	291	6.28e-103	1..168	1..168

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5340849..5340891	41	N° 2	5341196..5341662	465
join(5340849..5340891,5341196..5341662)

Literature and cross-references CparGPx01

Protein ref.	JGI genome: 96955
DNA ref.	JGI genome: scaffold_1 (5340849..5341662)
EST ref.	GenBank: GR389078.1

Protein sequence: CparGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	170
PWM (Da):	19019.66	Transmb domain:	i7-29o
PI (pH):	8.02

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASATSFYDFKVPDKKGEEKPLSEYKGKVVLVVNTASKCGFTPQYAGLEKLWKDIKEKHPDDFVILGFPCNQFGGQEPGTNDDIQSFCQVNYGVSFPIMGKIDVNGDGASDLYKWLKKEK
PGIMGIQMVKWNFEKFLIGRDGTVKGRWASTTKPESLEKPILDEIAIKPE*

Retrieve as FASTA

Remarks

complete sequence from genomic (scaffold_1, 1 intron) and 8 ESTs. Strain "EP155"

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCTCAGCAACCAGCTTTTACGACTTCAAGGTCCCTGACACAGTAAGCACCATCCTCCAGACCTGAACCACAGCTTGCCTCGCCCTCGCCTCTACATTGCTACGGCGTCGAGCTGGA
ACACCGCTGTCCTTCCTCATTCGCACCTCGCTTTGCCCCGTCCCTCTCTTCCACCTGCCTTTCTCGTCCCTGCGCGCAGACGAGTGAACCACCAGATCTTCAGCAGCAACCCATGTTTCT
TCTGCCCCTCCCCGTCCAGATTTCATCACCAGACGCCCCAGACAAGTGGTGGCGAATTGGGTACCAGCTGTGTACATGTGTGGCTAACAGATACAACCTCACTCCACAGAGAAGGGCGAG
GAGAAGCCCCTGTCCGAGTACAAGGGCAAGGTCGTGCTCGTCGTCAACACCGCCTCCAAGTGCGGCTTCACGCCCCAGTACGCGGGGCTCGAGAAGCTCTGGAAGGACATCAAGGAGAAG
CACCCAGACGACTTTGTCATTCTGGGCTTCCCCTGCAACCAGTTCGGCGGCCAGGAGCCCGGCACCAACGACGATATCCAGTCCTTCTGCCAGGTCAACTACGGCGTCTCCTTCCCCATC
ATGGGCAAGATCGACGTCAACGGCGACGGCGCCAGCGATCTGTACAAGTGGCTCAAGAAGGAGAAGCCTGGCATCATGGGCATCCAGATGGTCAAGTGGAACTTTGAGAAATTCCTCATT
GGCCGCGACGGCACCGTCAAGGGCCGCTGGGCCAGCACCACCAAGCCAGAATCGCTCGAGAAGCCCATCCTGGACGAGATCGCCATCAAGCCAGAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCTCAGCAACCAGCTTTTACGACTTCAAGGTCCCTGACAAGAAGGGCGAGGAGAAGCCCCTGTCCGAGTACAAGGGCAAGGTCGTGCTCGTCGTCAACACCGCCTCCAAGTGCGGC
TTCACGCCCCAGTACGCGGGGCTCGAGAAGCTCTGGAAGGACATCAAGGAGAAGCACCCAGACGACTTTGTCATTCTGGGCTTCCCCTGCAACCAGTTCGGCGGCCAGGAGCCCGGCACC
AACGACGATATCCAGTCCTTCTGCCAGGTCAACTACGGCGTCTCCTTCCCCATCATGGGCAAGATCGACGTCAACGGCGACGGCGCCAGCGATCTGTACAAGTGGCTCAAGAAGGAGAAG
CCTGGCATCATGGGCATCCAGATGGTCAAGTGGAACTTTGAGAAATTCCTCATTGGCCGCGACGGCACCGTCAAGGGCCGCTGGGCCAGCACCACCAAGCCAGAATCGCTCGAGAAGCCC
ATCCTGGACGAGATCGCCATCAAGCCAGAG

Retrieve as FASTA