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Entry information : AdelCIIBB[P]18
Entry ID 9720
Creation 2011-11-17 (Christophe Dunand)
Last sequence changes 2011-11-17 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: AdelCIIBB[P]18
Name AdelCIIBB[P]18
Class Other class II peroxidase type B    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Auriculariaceae Auricularia
Organism Auricularia delicata    [TaxId: 160860 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AdelCIIBB[P]18
start..stop		 S start..stop
AdelCIIBA03 400 4.12e-142 1..208 98..305
AdelCIIBA02 399 7.37e-142 1..208 99..306
AdelCIIBA04 383 2.01e-135 1..208 99..306
AdelCIIBA10 379 8.21e-134 1..208 99..306
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9720' 'join(1072..1112,1167..1308,1359..1386,1442..1654,1709..1807,1861..1994)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1072..1112 39 N° 2 1167..1308 140 N° 3 1359..1386 26 N° 4 1442..1654 211
N° 5 1709..1807 97 N° 6 1861..1994 132  
join(1072..1112,1167..1308,1359..1386,1442..1654,1709..1807,1861..1994)


exon

Literature and cross-references AdelCIIBB[P]18
DNA ref. JGI genome:   scaffold_153 (1072..1994)
Protein sequence: AdelCIIBB[P]18
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   218
PWM (Da):   %s   23279.64  
PI (pH):   %s   4.3
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ANEGIDFITAFLQPFADTVQITYGDAIQFGAAVGLSLCPDAPRIPAFVGRPNATQAAPDKVPEPDDDPTTIFARMKDAGFTPVELVHLLASHSVADQAGVDPEPQVLGAPFDSTPFSFDS
QVFLEVMLRGTLFPGSGPNPGEEKSPLPGEFRLLSDRVFARHNETACAWQENALSQATMASNFQTAFSKLSLLGHDKNSLLDCSELIVHLRLSLIPE

Retrieve as FASTA  
Remarks Partial sequence from genomic (6 last exons). Uncorrect prediction from JGI (one exon not predicted).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCCAACGAGGGCATCGACTTTATCACCGCGTTCCTGCAGCCCCGTGCGTTTCGCAGGGCATTTCCTGCTTTAGAATGTTGCGCTGACGCCGGCGAAGGTTCGCGGACACCGTCCAGATCA
CGTACGGCGACGCCATCCAGTTCGGCGCCGCCGTCGGGCTCTCGCTCTGCCCCGACGCGCCGCGCATCCCCGCGTTCGTCGGCCGCCCGAACGCGACGCAGGCCGCGCCCGACAAGACTC
TGTGAGCACTCGCCCTCCTACAGACCCGCGTGTGGCTAACGCGCACATCAGGTGCCCGAGCCCGACGACGACCCAACGAGAGTGAGTGTACTACTGGCTGCGGGGGGCGAACGAACGCTA
ACGCGCGCGCCCGCAGCGATCTTTGCGCGCATGAAGGACGCGGGCTTCACGCCCGTCGAGCTCGTGCACCTGCTCGCGTCGCACAGCGTCGCGGACCAGGCCGGCGTCGACCCCGAGCCG
CAGGTGCTCGGCGCGCCGTTCGACTCGACGCCGTTCAGCTTCGACTCGCAGGTCTTCCTCGAGGTCATGCTGCGCGGCACGCTCTTCCCGGGGTCCGGACCCAACCCTGTGGTGCGCGCC
GCCGTCCCCCGCAGTGATTTCGCGCTGACGCGCGGCGACGCGAAGGCGAGGAGAAGAGCCCGCTGCCTGGTGAATTCCGCCTGCTGTCTGACCGCGTGTTCGCACGGCACAACGAGACGG
CGTGCGCGTGGCAGGAGAATGCTCTCGTACGTTGCCCTCTCTCTCTTTCTCTCCTGTTTGCGTGCTGAGGAGAGGACAGTGAGCCAGGCGACGATGGCGTCCAACTTCCAGACGGCGTTC
TCGAAGCTATCGCTCCTTGGGCACGACAAGAACTCGCTTCTCGACTGCAGCGAGCTCATCGTACATCTGCGCCTCTCACTCATACCGGAATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCCAACGAGGGCATCGACTTTATCACCGCGTTCCTGCAGCCGTTCGCGGACACCGTCCAGATCACGTACGGCGACGCCATCCAGTTCGGCGCCGCCGTCGGGCTCTCGCTCTGCCCCGAC
GCGCCGCGCATCCCCGCGTTCGTCGGCCGCCCGAACGCGACGCAGGCCGCGCCCGACAAGACTGTGCCCGAGCCCGACGACGACCCAACGACGATCTTTGCGCGCATGAAGGACGCGGGC
TTCACGCCCGTCGAGCTCGTGCACCTGCTCGCGTCGCACAGCGTCGCGGACCAGGCCGGCGTCGACCCCGAGCCGCAGGTGCTCGGCGCGCCGTTCGACTCGACGCCGTTCAGCTTCGAC
TCGCAGGTCTTCCTCGAGGTCATGCTGCGCGGCACGCTCTTCCCGGGGTCCGGACCCAACCCTGGCGAGGAGAAGAGCCCGCTGCCTGGTGAATTCCGCCTGCTGTCTGACCGCGTGTTC
GCACGGCACAACGAGACGGCGTGCGCGTGGCAGGAGAATGCTCTGAGCCAGGCGACGATGGCGTCCAACTTCCAGACGGCGTTCTCGAAGCTATCGCTCCTTGGGCACGACAAGAACTCG
CTTCTCGACTGCAGCGAGCTCATCGTACATCTGCGCCTCTCACTCATACCGGAATGA

Retrieve as FASTA