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Entry information : BaCIIBB02
Entry ID 9724
Creation 2011-11-17 (Christophe Dunand)
Last sequence changes 2012-12-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-12-04 (Christophe Dunand)
Peroxidase information: BaCIIBB02
Name BaCIIBB02
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Meruliaceae Bjerkandera
Organism Bjerkandera adusta    [TaxId: 5331 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BaCIIBB02
start..stop		 S start..stop
BaCIIBB06 588 0 1..366 1..366
BaCIIBB08 541 0 1..366 1..366
TvCIIBB02_IFO30340 538 0 1..366 1..365
PbreCIIBB09 536 0 1..366 1..365
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9724' 'join(446806..446866,446919..447069,447124..447180,447234..447368,447419..447486,447538..447670,447727..447852,447909..448024,448080..448255,448314..448378,448440..448452)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 446806..446866 59 N° 2 446919..447069 149 N° 3 447124..447180 55 N° 4 447234..447368 133
N° 5 447419..447486 66 N° 6 447538..447670 131 N° 7 447727..447852 124 N° 8 447909..448024 114
N° 9 448080..448255 174 N° 10 448314..448378 63 N° 11 448440..448452 11  
join(446806..446866,446919..447069,447124..447180,447234..447368,447419..447486, 447538..447670,447727..447852,447909..448024,448080..448255,448314..448378,44844 0..448452)


exon

Literature and cross-references BaCIIBB02
DNA ref. JGI genome:   scaffold_24 (446806..448382)
Protein sequence: BaCIIBB02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   366 (345)
PWM (Da):   %s   38154.79 (35962.6)  
PI (pH):   %s   4.16 (4.14) Peptide Signal:   %s   cut: 22 range:22-366
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKQLLATVSLAFSLTAVEAALTRRVACPDGVNTATNAACCSLF
AIRDDLQKNLFDNGGCGEDVHESLRLTFHDAIGISPAIAATGKFGGGGADGSIAIFEDIETNFHANLGVDEIIDEQKPILARHNISTADFIQFAGAVGLSNCPGAPQVEFLGRTDATQPAPDLTV
PEPSDTVDSILARFDDAGGFTAAEIIALLASHTIAAADHVDPTIPGTPFDSTASTFDSQFFVETLLKGTLFPGTSGNVGEVMSPIAGEMRLQSDFEFAQDSRTACEWQSFNNQDKIKTAF
AAAFAKMTTLGNDRSQMVDCSEVLPRVSTATLPPAHLPAGKTLADVQQCADTPFPSLSADPGPATTVPPVPPS

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns). incorrect prediction from JGI (last very short exon is missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAGCTCCTTGCTACTGTCTCTCTCGCCTTCTCCCTCACCGCCGTCGAAGAGGTTTGTAAGGAGTCACTCTGCCCACCACTTGTACTCATCTACCGTGCTTTAGCCGCC
CTGACCCGCCGGGTTGCTTGTCCCGATGGCGTGAACACCGCGACGAACGCGGCTTGCTGTTCTCTGTTCGCCATCCGCGACGATCTTCAGAAGAACCTGTTCGACAACGGCGGTTGTGGC
GAAGATGTTCACGAGTCTCTCCGTCTCTGTGAGTATACGACCAACCCCGAATTCCGACCTAAAAATTGACCGGATATACTAGCACCTTCCACGACGCTATCGGTATTTCTCCCGCCATCG
CAGCAACCGGAAAATTCGGGGGTGCGTATACACCCGAAATGTGATTTCTCTCCGCTTTCTGACTAGTCACGCAGAGGTGGAGGTGCCGATGGCTCTATTGCCATCTTCGAGGACATCGAG
ACCAACTTCCACGCTAACTTGGGCGTTGACGAGATCATCGACGAGCAGAAGCCCATCCTGGCTAGACACAACATCTCTACCGCGGACTTTTGTTCGTCGCTCCCTGTTCATTCTCCATTA
CGCTGCTGATCGATTGTTTAGCATCCAGTTTGCTGGCGCAGTCGGTTTGAGCAACTGCCCCGGCGCTCCTCAGGTCGAGTTCCTCTTCGCGGTAAGCGAAACCGTCTTTCCTCATAACGC
ATCAACTCACGCGACTGTACAGGCCGCACAGACGCCACCCAGCCTGCTCCCGACCTGACCGTCCCCGAGCCTTCCGACACCGTCGACTCCATCCTCGCTCGCTTCGATGACGCCGGAGGC
TTCACCGCCGCGGAGATCATTGCCCTTCTCGCCTCTCGTAAGGTCATCTACCACTGCCAAAGGGATCTAAGCTGATCCACGCCACCTATGCAGCCACACCATCGCCGCGGCCGACCACGT
CGACCCCACCATCCCGGGAACTCCGTTCGACTCGACTGCCTCCACCTTCGACTCTCAGTTCTTCGTCGAGACGCTACTCAAGGGCACGCTCTTCCCCGGGGGTAAGCCTACCTTCGACCC
CACCTCTCGCGTCCATCTTTGACACTAAGCACCACAGAACTTCGGGCAACGTCGGAGAGGTGATGTCCCCCATCGCGGGTGAGATGCGTCTGCAGTCCGACTTCGAGTTCGCACAAGACT
CTCGTACTGCTTGCGAGTGGCAGTCTTTCGTCACAGTGCGTACCCTCTCCTTGCCTTTCGCTCCGCCCGGATATTCTGACCGTATACCAGACAACCAGGACAAGATCAAGACCGCGTTTG
CTGCCGCGTTCGCCAAGATGACCACCCTCGGAAATGACAGGAGCCAGATGGTCGACTGCTCCGAGGTGCTGCCCAGAGTCTCGACTGCCACTCTCCCGCCCGCGCACCTCCCCGCCGGCA
AGACGCTCGCCGACGTCCAACAGGCTCTGTACGCACTTCATATTTGCGCTGTGTGCGAGAAATTGAGCTGACGATACCTGCATCAGTGCGCTGACACGCCCTTCCCGTCTCTGTCTGCCG
ACCCCGGCCCGGCCACCACTGTTCCCCCTGTGTGTAAGTGTTCTACGATACAACGCCTTTAGCGACGGTGTGCTAACGTGATAAATTCATACAGCCCGCCTTCCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAGCTCCTTGCTACTGTCTCTCTCGCCTTCTCCCTCACCGCCGTCGAAGCCGCCCTGACCCGCCGGGTTGCTTGTCCCGATGGCGTGAACACCGCGACGAACGCGGCT
TGCTGTTCTCTGTTCGCCATCCGCGACGATCTTCAGAAGAACCTGTTCGACAACGGCGGTTGTGGCGAAGATGTTCACGAGTCTCTCCGTCTCACCTTCCACGACGCTATCGGTATTTCT
CCCGCCATCGCAGCAACCGGAAAATTCGGAGGTGGAGGTGCCGATGGCTCTATTGCCATCTTCGAGGACATCGAGACCAACTTCCACGCTAACTTGGGCGTTGACGAGATCATCGACGAG
CAGAAGCCCATCCTGGCTAGACACAACATCTCTACCGCGGACTTCATCCAGTTTGCTGGCGCAGTCGGTTTGAGCAACTGCCCCGGCGCTCCTCAGGTCGAGTTCCTCTTCGGCCGCACA
GACGCCACCCAGCCTGCTCCCGACCTGACCGTCCCCGAGCCTTCCGACACCGTCGACTCCATCCTCGCTCGCTTCGATGACGCCGGAGGCTTCACCGCCGCGGAGATCATTGCCCTTCTC
GCCTCCCACACCATCGCCGCGGCCGACCACGTCGACCCCACCATCCCGGGAACTCCGTTCGACTCGACTGCCTCCACCTTCGACTCTCAGTTCTTCGTCGAGACGCTACTCAAGGGCACG
CTCTTCCCCGGAACTTCGGGCAACGTCGGAGAGGTGATGTCCCCCATCGCGGGTGAGATGCGTCTGCAGTCCGACTTCGAGTTCGCACAAGACTCTCGTACTGCTTGCGAGTGGCAGTCT
TTCGTCAACAACCAGGACAAGATCAAGACCGCGTTTGCTGCCGCGTTCGCCAAGATGACCACCCTCGGAAATGACAGGAGCCAGATGGTCGACTGCTCCGAGGTGCTGCCCAGAGTCTCG
ACTGCCACTCTCCCGCCCGCGCACCTCCCCGCCGGCAAGACGCTCGCCGACGTCCAACAGGCTTGCGCTGACACGCCCTTCCCGTCTCTGTCTGCCGACCCCGGCCCGGCCACCACTGTT
CCCCCTGTCCCGCCTTCCTAG

Retrieve as FASTA