Entry information : TsPrx57 (Thhalv10014171m)
Entry ID 9779
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-18 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-12-24 (Christophe Dunand)
Peroxidase information: TsPrx57 (Thhalv10014171m)
Name (synonym) TsPrx57 (Thhalv10014171m)
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx57
start..stop
S start..stop
BrPrx57-1Aa_other 587 0 1..311 1..311
CagraPrx04 584 0 1..311 1..311
CrubPrx78 572 0 8..311 8..311
AtPrx57 567 0 3..310 6..313
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9779' 'complement(join(6059958..6060243,6060667..6061115,6061329..6061526))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6061329..6061526 196 N° 2 6060667..6061115 447 N° 3 6059958..6060243 284  
complement(join(6059958..6060243,6060667..6061115,6061329..6061526))


exon

Literature and cross-references TsPrx57 (Thhalv10014171m)
DNA ref. Phytozome 12:   scaffold_2 (6061526..6059958)
Protein sequence: TsPrx57 (Thhalv10014171m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   310 (291)
PWM (Da):   %s   33647.1 (31309.9) Transmb domain:   %s   i7-26o
PI (pH):   %s   10.5 (10.38) Peptide Signal:   %s   cut: 20 range:20-310
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMKFSSLVVFFFIFPIAFAQLRVGFYSQSCPQAETIVRNLVRQRFGADPTVTAALLRMHFHDCFVRGCDASLLIDSTNSEKAAGPNGSVREFDLIDRIKAALEAACPSTVSCADIVTLAT
RDSVALAGGPSYSIPTGRRDGLVSNSADVALPGPTISVSGAVSFFTVKGMNVFDAVALMGAHTVGQANCGLFNDRITNFQGTGRPDPSMDPALVSSLRNTCASRGSAGLEQSTPLRFDNQ
FFKQIRKRRGVLQVDQRLSSDRQTRGVVARYANNNAFFKRQFARAMVKMGAVDVLTGRAGEIRRNCRRFN*

Retrieve as FASTA  
Remarks Complete sequence fromm genomic (introns 1 and 3'). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGAAGTTTTCTTCTCTTGTTGTGTTTTTCTTTATTTTCCCAATCGCATTTGCTCAACTCCGAGTCGGGTTTTACAGCCAGTCATGCCCTCAAGCCGAGACTATCGTACGGAATTTG
GTGCGCCAGCGGTTTGGTGCTGACCCAACCGTCACTGCCGCTTTGCTCCGTATGCATTTCCACGATTGTTTCGTTAGG
GTAAGACTTTACTATAGCATTTTGATATGGCTCTAACATTTT
CAAACATCTAAACTTTTCGTTGATGAATATGTGGGAAAAATACGTTGTTGTATAAAATAAAATGTATATTTTTAGAAAATTTTCATAAAAATTAATTACACCAATTTCAGATCATATCAT
TTAGTCTGGTAGTTAAATTTTATATCAATAACGTTTACTCGTGCTTTGTAGGGGGATGCGATGCTTCGCTCCTTATAGACTCAACCAACTCTGAGAAAGCTGCCGGTCCAAACGGAAGCG
TCAGAGAATTTGACCTGATCGACCGCATCAAGGCTGCGCTAGAGGCCGCGTGTCCCTCCACGGTCTCATGTGCCGACATCGTAACATTAGCCACACGTGACTCGGTGGCATTAGCCGGAG
GCCCAAGCTACAGCATCCCCACGGGAAGGCGTGATGGTTTGGTCTCGAACAGTGCTGACGTGGCCCTACCTGGTCCAACCATCTCTGTCTCTGGAGCCGTCAGTTTCTTCACAGTCAAAG
GGATGAACGTGTTCGATGCCGTGGCTCTTATGGGTGCACACACCGTTGGTCAAGCAAACTGTGGTCTGTTCAATGATCGCATCACTAACTTCCAAGGAACCGGACGACCTGACCCGTCCA
TGGACCCCGCTTTGGTTTCCAG
GTAATTTTAAACCGGTTTGGTTCAATCAAACACCCACCAAATTCAAGACTGAATACTAATTTTAAAAGAACCTGAAATTTACTTTATACTTTGTTTAA
CTCAATAGCTTTTGATTTTATATAAAAAAAAAAGTCAATTCTCTAACTTTTGAAATCTTCAAAACGTATCCAACTATATATATAATTGTCTTTTCATATATGACATTTTCAATGGTTGAT
ATCATCTGAAGGAAAAGAAAAGGATATCTTTCAGTTAGTTAATTCCAAGAAGTTGGATTTTTAAGACATTGTTTCTAAGAAAGTTAGAAAACGAATTTCCCTATGAAACCCTAAGCAAAT
TAGTTTCACATTCAATAAGCTTTTATTATTTTAACTCATCAGAATGATATTCTAAATGTTTTTTTTTTTTTTTGTAATGATGTAGCCCCTAAGGAACACATGTGCAAGCAGAGGTTCTGC
GGGACTAGAGCAATCGACTCCATTGAGGTTCGACAACCAATTCTTCAAGCAGATCCGTAAAAGGAGAGGAGTGTTGCAAGTTGACCAAAGGCTCTCGTCAGACCGACAGACTCGTGGTGT
TGTGGCTCGATATGCAAACAACAATGCCTTCTTCAAGCGTCAGTTCGCTAGAGCAATGGTGAAGATGGGAGCCGTTGATGTGCTTACCGGTCGTGCCGGTGAGATCAGGAGAAATTGCAG
GAGGTTCAACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGAAGTTTTCTTCTCTTGTTGTGTTTTTCTTTATTTTCCCAATCGCATTTGCTCAACTCCGAGTCGGGTTTTACAGCCAGTCATGCCCTCAAGCCGAGACTATCGTACGGAATTTG
GTGCGCCAGCGGTTTGGTGCTGACCCAACCGTCACTGCCGCTTTGCTCCGTATGCATTTCCACGATTGTTTCGTTAGG
GGATGCGATGCTTCGCTCCTTATAGACTCAACCAACTCTGAG
AAAGCTGCCGGTCCAAACGGAAGCGTCAGAGAATTTGACCTGATCGACCGCATCAAGGCTGCGCTAGAGGCCGCGTGTCCCTCCACGGTCTCATGTGCCGACATCGTAACATTAGCCACA
CGTGACTCGGTGGCATTAGCCGGAGGCCCAAGCTACAGCATCCCCACGGGAAGGCGTGATGGTTTGGTCTCGAACAGTGCTGACGTGGCCCTACCTGGTCCAACCATCTCTGTCTCTGGA
GCCGTCAGTTTCTTCACAGTCAAAGGGATGAACGTGTTCGATGCCGTGGCTCTTATGGGTGCACACACCGTTGGTCAAGCAAACTGTGGTCTGTTCAATGATCGCATCACTAACTTCCAA
GGAACCGGACGACCTGACCCGTCCATGGACCCCGCTTTGGTTTCCAG
CCTAAGGAACACATGTGCAAGCAGAGGTTCTGCGGGACTAGAGCAATCGACTCCATTGAGGTTCGACAACCAA
TTCTTCAAGCAGATCCGTAAAAGGAGAGGAGTGTTGCAAGTTGACCAAAGGCTCTCGTCAGACCGACAGACTCGTGGTGTTGTGGCTCGATATGCAAACAACAATGCCTTCTTCAAGCGT
CAGTTCGCTAGAGCAATGGTGAAGATGGGAGCCGTTGATGTGCTTACCGGTCGTGCCGGTGAGATCAGGAGAAATTGCAGGAGGTTCAACTGA

Retrieve as FASTA