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Entry information : TsPrx25 (Thhalv10016924m)
Entry ID 9788
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-18 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-30 (Christophe Dunand)
Peroxidase information: TsPrx25 (Thhalv10016924m)
Name (synonym) TsPrx25 (Thhalv10016924m)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx25
start..stop		 S start..stop
BrPrx25-1Aa_other 633 0 1..326 1..326
BstrPrx81 625 0 1..327 1..327
BrPrx25-1Ab_other 623 0 1..326 1..326
AalpPrx25 620 0 1..326 1..325
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 11227687..11227902 214 N° 2 11227428..11227607 178 N° 3 11227186..11227348 161 N° 4 11225750..11226171 420
complement(join(11225750..11226171,11227186..11227348,11227428..11227607,1122768 7..11227902))


exon

Literature and cross-references TsPrx25 (Thhalv10016924m)
DNA ref. Phytozome 12:   scaffold_10 (11227902..11225750)
Protein sequence: TsPrx25 (Thhalv10016924m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35325.94 (32572.5) Transmb domain:   %s   i13-35o
PI (pH):   %s   7.34 (7.36) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGVYLGNYCYVIIIVLVLGKEVISQSLSNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSAEQAALANGGLRGFEVIDDAKARLESECPGVVSCAD
ILALAARDAVDLSSGPSWRVPTGRKDGRISLASEASNLPSPLDSVAVQKQKFQNKGLDTHDLVTLLGAHTIGQTDCQFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCPPNGDGSKRVAL
DIGSPSKFDVSFFKNLRDGNAILESDQRLWSDAETKDVVKKYASTIRGLLGFRFDNEFGKAMVKMSSIDVKTDVNGEVRKVCSKVN*

Retrieve as FASTA  
Remarks Complete sequence fromm genomic (3 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGTGTACTTAGGCAACTACTGTTATGTAATTATAATAGTATTGGTGTTGGGAAAAGAAGTGATAAGTCAGTCGTTAAGTAATGGTTATTATTCAACTTCATGTCCCAAAGCTGAG
TCAATAGTAAGATCCACCGTTGAATCTCACTTTGATTCTGATCCCACTATTTCTCCTGGCCTGCTTAGGCTTCATTTCCATGACTGTTTTGTTCAGGTTCCAAATCTTCTTTAATCTCAT
TCTTCTCTAAGCAATTATACAAGTTAACTGAATGTTGAATTTGACCTATTATTAGGGGGTTGTGATGGATCGGTCTTAATCAAAGGGAAATCTGCCGAGCAAGCAGCTCTCGCTAATGGC
GGTCTTAGAGGTTTTGAGGTGATAGATGATGCGAAAGCCCGGCTAGAGTCAGAGTGTCCAGGAGTGGTGTCATGTGCAGATATACTTGCACTTGCTGCTCGTGACGCTGTTGACTTGGTA
CGCAAGTTTACTAAACCTAATTAGGGTTTACTTAAATTCTTTGGAAGATTATTTATTAATTACGTATGGAAAACAGAGAGTTCAGGGCCAAGCTGGCGAGTTCCAACGGGTCGTAAAGAC
GGGAGAATCTCGTTAGCGTCGGAGGCATCGAATCTACCTTCGCCACTTGACTCTGTTGCTGTTCAAAAGCAAAAGTTTCAAAACAAAGGATTGGATACTCATGATCTCGTCACTCTACTC
GGTTTGTTTTTCATCTCTCTGTCTTTTTTCTTTCTTTTTAGAAAATCTAACTTCTTGCTTTGACATCCATAATTTATATTCTACTAATTTCCCGCAAGAGAAGAGTCTATCTAATTTTTC
GTTTAAGAATCATATTTTCATTTTTCGATCATTTAACTTTTTATATTTTTATGAGTAATTGTTTTGTTCATCGGTATTTTTATCCATAGTTGCGGATCATTAGGACTTTAACTAAATCCG
GATGCAGAACGCGCTATCCATTAGTTAAACCACTACATTGAAAAATATGATTCATGAGTAAGTAGTTCATAGCTGTTAATAGCCTGTTATGCTAAATCCTACTATATACAGATATATGTT
TAAAAGAAACATAAAGTTCGAAATTTGAAAACAAATTTATGCACAAAAAACGCCAACATGGAAAAAAGTTTAAGTGCCTAAAAGTTGTAGTATGCCTTGTTTCATTTTATACTTTTTTCT
TGGATTTTAAGCAAAGGATCATTACACAATTAATCGTTGATTTGAGGAGGAAGATTTGAAATTGAAAAACACCTTAGCCACCGTCTTTCACAAAATCGATCAAGAAAATTATTAACTCGG
AAGATTAAAGTCATCTTTTCTTTGACGTATGTTAGATCGATCGTATTTGATCCTGACGAGGGTACGTCATAAAGTCCTAATGATCCGCAACTATAGATGCTTTGTTTTAAAAAGTTAGCT
TTTTATTCAGTAATTGTATTTTTTTTAGTTGAAAAGAACATAAAAATGAATGTTTTGAAATATCTAAAATGATTAATTATCTGGTTGAAATTTTTACTTCAAAAAACGCTGGTACGTAGT
AGCTGCTGAAGTTTAGAAATAAAAGTAAACTGAGACACTTGCTATTAGCCCATCTTGATCTTCTTCTTCATATTTTTTTTCTTTCTAAAATTTACACCTGCTTCTCTTGTCTCTAATGAA
CATGCATGTGCCATTTATCTTTTCTCTCCAAAATAATAACACATTATATATGCAGGTGTGCACATACAATAGGACAAACGGACTGTCAATTCTTCCGTTACCGTCTATACAACTTCACGG
TGACCGGAAACTCCGACCCAACCATAAGCCCATCGTTTCTTACGCAGCTCAAGACTCTTTGTCCTCCCAATGGAGACGGTTCAAAACGTGTTGCTCTTGACATTGGCAGTCCCTCGAAAT
TTGATGTTAGCTTCTTCAAGAACCTACGAGATGGTAACGCCATTTTGGAGTCGGACCAACGGCTTTGGTCGGACGCCGAGACAAAAGACGTGGTGAAGAAGTATGCGAGTACTATTAGGG
GTTTGTTAGGGTTTAGGTTTGATAATGAGTTTGGTAAAGCTATGGTTAAGATGAGTTCCATTGATGTAAAGACAGACGTCAATGGTGAGGTTAGGAAAGTTTGTTCCAAGGTGAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGTGTACTTAGGCAACTACTGTTATGTAATTATAATAGTATTGGTGTTGGGAAAAGAAGTGATAAGTCAGTCGTTAAGTAATGGTTATTATTCAACTTCATGTCCCAAAGCTGAG
TCAATAGTAAGATCCACCGTTGAATCTCACTTTGATTCTGATCCCACTATTTCTCCTGGCCTGCTTAGGCTTCATTTCCATGACTGTTTTGTTCAGGGTTGTGATGGATCGGTCTTAATC
AAAGGGAAATCTGCCGAGCAAGCAGCTCTCGCTAATGGCGGTCTTAGAGGTTTTGAGGTGATAGATGATGCGAAAGCCCGGCTAGAGTCAGAGTGTCCAGGAGTGGTGTCATGTGCAGAT
ATACTTGCACTTGCTGCTCGTGACGCTGTTGACTTGAGTTCAGGGCCAAGCTGGCGAGTTCCAACGGGTCGTAAAGACGGGAGAATCTCGTTAGCGTCGGAGGCATCGAATCTACCTTCG
CCACTTGACTCTGTTGCTGTTCAAAAGCAAAAGTTTCAAAACAAAGGATTGGATACTCATGATCTCGTCACTCTACTCGGTGCACATACAATAGGACAAACGGACTGTCAATTCTTCCGT
TACCGTCTATACAACTTCACGGTGACCGGAAACTCCGACCCAACCATAAGCCCATCGTTTCTTACGCAGCTCAAGACTCTTTGTCCTCCCAATGGAGACGGTTCAAAACGTGTTGCTCTT
GACATTGGCAGTCCCTCGAAATTTGATGTTAGCTTCTTCAAGAACCTACGAGATGGTAACGCCATTTTGGAGTCGGACCAACGGCTTTGGTCGGACGCCGAGACAAAAGACGTGGTGAAG
AAGTATGCGAGTACTATTAGGGGTTTGTTAGGGTTTAGGTTTGATAATGAGTTTGGTAAAGCTATGGTTAAGATGAGTTCCATTGATGTAAAGACAGACGTCAATGGTGAGGTTAGGAAA
GTTTGTTCCAAGGTGAATTAA

Retrieve as FASTA