Entry information : TsPrx15 (Thhalv10022774m)
Entry ID 9802
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-21 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-30 (Christophe Dunand)
Peroxidase information: TsPrx15 (Thhalv10022774m)
Name (synonym) TsPrx15 (Thhalv10022774m)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx15
start..stop
S start..stop
AruPrx15 633 0 1..336 1..335
AtPrx15 629 0 1..335 1..336
NoffPrx15-1A 627 0 1..336 1..335
BrPrx15-1Ac_other 627 0 1..337 1..337
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9802' 'join(948170..948409,948504..948695,948776..948941,949034..949446)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 948170..948409 238 N° 2 948504..948695 190 N° 3 948776..948941 164 N° 4 949034..949446 411
join(948170..948409,948504..948695,948776..948941,949034..949446)


exon

Literature and cross-references TsPrx15 (Thhalv10022774m)
DNA ref. Phytozome 12:   scaffold_11 (948170..949446)
Protein sequence: TsPrx15 (Thhalv10022774m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (314)
PWM (Da):   %s   36179.53 (33864.3)  
PI (pH):   %s   4.82 (4.73) Peptide Signal:   %s   cut: 23 range:23-336
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARIGSLLVLLSLACSLTLCIGDDESNYGGNRGNLSPGFYSSSCPKAEEIVKSVVAQAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKSSNPNSRSARGFEVVDQIKAAL
ENECPGTVSCADVLTLAARDSSVLTGGPSWMVPLGRRDSTTASLSGSNNNIPAPNNTFNTILSRFTNQGLDLTDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDSTLEQSYAANLRQM
CPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEESSELVKKYAEDQEEFFEQFAESMVKMGNISPLTGSSGEIRKNCRKVNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAAGAATCGGAAGCCTTCTCGTTCTTCTCTCTCTCGCTTGCTCTCTTACTCTCTGCATCGGGGACGACGAGAGTAATTATGGTGGTAATAGAGGGAACCTTTCCCCAGGTTTCTAC
AGCAGCTCGTGCCCTAAAGCCGAGGAGATCGTGAAGTCAGTTGTAGCCCAAGCTGTTGCAAGAGAGACTCGTATGGCTGCTTCTCTCATGAGGCTCCACTTCCACGATTGTTTTGTTCAG
AGGTACTCAATGATTTTTTTTTTAAGTTACTTTCTCAACAAGCTAACGATTAATGTAGAGAATCATCATTGTATCTATTTGAATGAAAATGTGTAGGGTTGTGATGGCTCGTTGCTTTTA
GACACCAGTGGGAGTATAGTTACTGAGAAAAGCTCTAACCCTAACAGCAGATCGGCTCGCGGGTTTGAGGTTGTCGACCAGATCAAAGCTGCGTTAGAGAATGAATGCCCTGGAACTGTT
TCTTGCGCTGACGTCTTAACTCTGGCCGCTAGAGACTCATCTGTTCTT
TTGTAAGTTGATTTCTTTCTTTCTCTCTCTTGCATGCTTATTTAAGTTCTCAAGATCTAAATTGGTTTCGGT
TTGAGTGTAGACTGGCGGACCAAGCTGGATGGTTCCTTTGGGAAGAAGAGATTCGACAACTGCCAGCTTGAGTGGCTCAAATAACAACATTCCTGCACCAAACAACACTTTCAACACAAT
TCTCTCCAGATTTACTAATCAGGGTCTTGATCTAACCGACCTCGTTGCTCTCTCCG
CGGTAAGCTTACTTTACACACAAGGAAGAGATATGGTGATGGTTACTTTACTTGCTTCTCAAGC
TGACGTTAAACCCTAATATGTCTTTGTCAGGGAGTCACACCATTGGATTCTCAAGATGCACGAGTTTCAGGCAAAGACTTTACAACCAATCCGGAAACGGAAGTCCCGACTCCACCTTAG
AGCAATCCTACGCTGCTAACTTGCGCCAGATGTGTCCTAGATCAGGTGGGGACCAGAACCTGTCGGAGCTTGACATCAACAGTGCCGGGAGGTTTGATAACAGCTACTTCAAGAACTTGA
TCGAGAACATGGGACTTTTGAATTCCGACCAGGTCTTGTTCTCTAGTAACGAGGAATCGAGTGAGCTTGTGAAGAAGTATGCAGAGGATCAAGAAGAGTTCTTCGAGCAGTTCGCGGAAT
CGATGGTCAAGATGGGGAATATCTCTCCCTTGACAGGTTCAAGTGGTGAGATCAGGAAGAACTGTAGGAAGGTTAACTCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAAGAATCGGAAGCCTTCTCGTTCTTCTCTCTCTCGCTTGCTCTCTTACTCTCTGCATCGGGGACGACGAGAGTAATTATGGTGGTAATAGAGGGAACCTTTCCCCAGGTTTCTAC
AGCAGCTCGTGCCCTAAAGCCGAGGAGATCGTGAAGTCAGTTGTAGCCCAAGCTGTTGCAAGAGAGACTCGTATGGCTGCTTCTCTCATGAGGCTCCACTTCCACGATTGTTTTGTTCAG
GGTTGTGATGGCTCGTTGCTTTTAGACACCAGTGGGAGTATAGTTACTGAGAAAAGCTCTAACCCTAACAGCAGATCGGCTCGCGGGTTTGAGGTTGTCGACCAGATCAAAGCTGCGTTA
GAGAATGAATGCCCTGGAACTGTTTCTTGCGCTGACGTCTTAACTCTGGCCGCTAGAGACTCATCTGTTCTT
ACTGGCGGACCAAGCTGGATGGTTCCTTTGGGAAGAAGAGATTCGACA
ACTGCCAGCTTGAGTGGCTCAAATAACAACATTCCTGCACCAAACAACACTTTCAACACAATTCTCTCCAGATTTACTAATCAGGGTCTTGATCTAACCGACCTCGTTGCTCTCTCCG
GG
AGTCACACCATTGGATTCTCAAGATGCACGAGTTTCAGGCAAAGACTTTACAACCAATCCGGAAACGGAAGTCCCGACTCCACCTTAGAGCAATCCTACGCTGCTAACTTGCGCCAGATG
TGTCCTAGATCAGGTGGGGACCAGAACCTGTCGGAGCTTGACATCAACAGTGCCGGGAGGTTTGATAACAGCTACTTCAAGAACTTGATCGAGAACATGGGACTTTTGAATTCCGACCAG
GTCTTGTTCTCTAGTAACGAGGAATCGAGTGAGCTTGTGAAGAAGTATGCAGAGGATCAAGAAGAGTTCTTCGAGCAGTTCGCGGAATCGATGGTCAAGATGGGGAATATCTCTCCCTTG
ACAGGTTCAAGTGGTGAGATCAGGAAGAACTGTAGGAAGGTTAACTCTTGA

Retrieve as FASTA