Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
358 |
PWM (Da): |
39374.46 |
|
PI (pH):
| 5.43 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKSTVEEDVS SFYVSIAEED DDRSYSLSSD YYRQSCPSVE RIVRKMIRDV HHSRPSIAPS LIRLLFHDCF VEGCDASVLL DSDGSMISEK EAPPNLSLKG LDVIDDIKSE LEHFCPGVVS
CADIIVLAAR ESVKVAGGPR YVVETGRKDS LGAFKEAAER WLPSPNANLS DILHVFASKG FNEQETVSLL GAHSIGITHC IFFENRLYNF SGTGKPDPEL NPEFLEELKA VCPFSAPSSS
PSPHMCSGSA PSLPASGNSK NKTDGVIDLS FNNEGGDAHF GTRYYRRLRL GKGVMFADQQ LTTNTKTELW VRRYSENPAL FRADFEDAMI KLSNHGVLTG HLGQVRKSCS KVLPPDED*
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic. Incorrect prediction from phytozome (Short PS before 'SCADII' was missing which has been completed). No EST. |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCCA CCGTTGAAGA AGATGTGAGC TCTTTCTACG TGTCTATCGC AGAAGAGGAT GACGATCGAT CTTACTCGCT CAGCTCGGAT TACTACCGCC AGTCTTGCCC TTCGGTAGAG
AGAATCGTTA GGAAAATGAT CAGAGATGTC CACCATAGTA GACCTAGCAT AGCTCCGTCT CTCATCCGCC TCCTATTTCA TGATTGCTTC GTCGAGGTCA GATTTCCTCT TCCACCTATC
TCGATTTTGG TAATCTCGTC TGTTACAAGT ACGATAAGAT TGTTTGTGAA AATATATTGT TCAGGGAGCG TCCTATTGTG ATATCTTGCA AATTAGATTA GGGGAATTCC GCTTGGTCAA
TAGATTTCTG GCTCTTGATC TTGCCTACGC ATGATTTGAT GTTGTGATTT CTTTTAGTTC TTGTTGAAGT TGTTCATGTT GCAATTGGGG ACATTGTGTT TGTATGCAAC TGGAAAATGA
TCTTATGTTG TGAATTCCTT TAGCTCACTT TTTGAAGTTT CTCGTGTTAA AAAAGTGGAT TTTTGTTTGT GCTCAGGGAT GTGATGCATC AGTCCTTCTG GACTCGGATG GATCTATGAT
ATCTGAGAAA GAGGCACCTC CGAACCTCTC TTTGAAAGGG TTAGATGTGA TTGACGATAT TAAGTCTGAG CTCGAGCATT TCTGTCCTGG AGTTGTTTCC TGCGCGGACA TTATTGTCTT
GGCTGCTAGA GAGTCTGTTA AAGTGGTGAA TACCCATCTC TCTTACTCTC TTCTGGTTTG TCCATGTTAA TATTTCTAAT CTCTTGCCTT GTGAACCTTT CAGGCAGGTG GTCCACGATA
TGTTGTTGAA ACTGGAAGGA AAGATAGTTT AGGGGCCTTC AAGGAAGCTG CAGAACGATG GCTTCCTTCA CCAAATGCTA ATCTCTCGGA TATTCTTCAT GTATTTGCCT CCAAGGGATT
TAACGAGCAA GAAACCGTCA GTCTACTTGG TATTCCCTCT CGTGTTATCT CAAACATGTC TCTCTTTTGT CCTGATTTGT ATATTCTGAC TGTACTAATT CAGGAGCACA CAGCATTGGC
ATTACGCACT GCATATTTTT CGAGAACCGG CTCTACAACT TCTCAGGAAC AGGCAAACCT GACCCTGAAC TCAATCCAGA GTTCCTTGAA GAACTAAAAG CCGTATGCCC CTTCTCTGCG
CCGTCTTCAT CTCCATCTCC ACATATGTGC TCTGGGTCAG CACCTTCCTT GCCTGCATCA GGGAACTCGA AGAACAAAAC TGATGGAGTG ATTGATTTGA GCTTTAACAA TGAAGGAGGT
GATGCTCATT TCGGGACAAG ATACTATAGA AGACTAAGGC TTGGGAAAGG GGTGATGTTT GCTGATCAGC AACTTACCAC CAATACTAAG ACAGAGTTAT GGGTGAGACG TTATTCTGAG
AATCCAGCTT TATTCCGTGC AGATTTCGAG GATGCAATGA TTAAACTCTC CAATCATGGA GTCTTGACTG GTCATCTAGG TCAAGTGAGA AAAAGTTGTT CAAAAGTCCT CCCACCAGAT
GAAGATTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCCA CCGTTGAAGA AGATGTGAGC TCTTTCTACG TGTCTATCGC AGAAGAGGAT GACGATCGAT CTTACTCGCT CAGCTCGGAT TACTACCGCC AGTCTTGCCC TTCGGTAGAG
AGAATCGTTA GGAAAATGAT CAGAGATGTC CACCATAGTA GACCTAGCAT AGCTCCGTCT CTCATCCGCC TCCTATTTCA TGATTGCTTC GTCGAGGGAT GTGATGCATC AGTCCTTCTG
GACTCGGATG GATCTATGAT ATCTGAGAAA GAGGCACCTC CGAACCTCTC TTTGAAAGGG TTAGATGTGA TTGACGATAT TAAGTCTGAG CTCGAGCATT TCTGTCCTGG AGTTGTTTCC
TGCGCGGACA TTATTGTCTT GGCTGCTAGA GAGTCTGTTA AAGTGGCAGG TGGTCCACGA TATGTTGTTG AAACTGGAAG GAAAGATAGT TTAGGGGCCT TCAAGGAAGC TGCAGAACGA
TGGCTTCCTT CACCAAATGC TAATCTCTCG GATATTCTTC ATGTATTTGC CTCCAAGGGA TTTAACGAGC AAGAAACCGT CAGTCTACTT GGAGCACACA GCATTGGCAT TACGCACTGC
ATATTTTTCG AGAACCGGCT CTACAACTTC TCAGGAACAG GCAAACCTGA CCCTGAACTC AATCCAGAGT TCCTTGAAGA ACTAAAAGCC GTATGCCCCT TCTCTGCGCC GTCTTCATCT
CCATCTCCAC ATATGTGCTC TGGGTCAGCA CCTTCCTTGC CTGCATCAGG GAACTCGAAG AACAAAACTG ATGGAGTGAT TGATTTGAGC TTTAACAATG AAGGAGGTGA TGCTCATTTC
GGGACAAGAT ACTATAGAAG ACTAAGGCTT GGGAAAGGGG TGATGTTTGC TGATCAGCAA CTTACCACCA ATACTAAGAC AGAGTTATGG GTGAGACGTT ATTCTGAGAA TCCAGCTTTA
TTCCGTGCAG ATTTCGAGGA TGCAATGATT AAACTCTCCA ATCATGGAGT CTTGACTGGT CATCTAGGTC AAGTGAGAAA AAGTTGTTCA AAAGTCCTCC CACCAGATGA AGATTGA
|
Retrieve as FASTA
|
|