Entry information : TsPrx48-1 (Thhalv10025607m / ThPrx48-1)
Entry ID 9827
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2012-07-27 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: TsPrx48-1 (Thhalv10025607m / ThPrx48-1)
Name (synonym) TsPrx48-1 (Thhalv10025607m / ThPrx48-1)
Class Class III peroxidase     [Orthogroup: Prx026]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx48-1
start..stop
S start..stop
TsPrx48-2 483 8e-172 2..356 54..414
BrPrx48-1Ab_other 464 9e-165 2..354 30..392
AtPrx48 454 1e-160 13..354 56..402
AhalPrx36 454 2e-160 2..354 48..403
Literature and cross-references TsPrx48-1 (Thhalv10025607m / ThPrx48-1)
DNA ref. Phytozome 12:   scaffold_1 (3836651..3835081)
Protein sequence: TsPrx48-1 (Thhalv10025607m / ThPrx48-1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359
PWM (Da):   %s   39374.46  
PI (pH):   %s   5.43
Sequence
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Send to Peroxiscan
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MKSTVEEDVS SFYVSIAEED DDRSYSLSSD YYRQSCPSVE RIVRKMIRDV HHSRPSIAPS LIRLLFHDCF VEGCDASVLL DSDGSMISEK EAPPNLSLKG LDVIDDIKSE LEHFCPGVVS  CADIIVLAAR ESVKVAGGPR YVVETGRKDS LGAFKEAAER WLPSPNANLS DILHVFASKG FNEQETVSLL GAHSIGITHC IFFENRLYNF SGTGKPDPEL NPEFLEELKA VCPFSAPSSS 
PSPHMCSGSA PSLPASGNSK NKTDGVIDLS FNNEGGDAHF GTRYYRRLRL GKGVMFADQQ LTTNTKTELW VRRYSENPAL FRADFEDAMI KLSNHGVLTG HLGQVRKSCS KVLPPDED* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (Short PS before 'SCADII' was missing which has been completed). No EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAATCCA CCGTTGAAGA AGATGTGAGC TCTTTCTACG TGTCTATCGC AGAAGAGGAT GACGATCGAT CTTACTCGCT CAGCTCGGAT TACTACCGCC AGTCTTGCCC TTCGGTAGAG  AGAATCGTTA GGAAAATGAT CAGAGATGTC CACCATAGTA GACCTAGCAT AGCTCCGTCT CTCATCCGCC TCCTATTTCA TGATTGCTTC GTCGAGGTCA GATTTCCTCT TCCACCTATC  TCGATTTTGG TAATCTCGTC TGTTACAAGT ACGATAAGAT TGTTTGTGAA AATATATTGT TCAGGGAGCG TCCTATTGTG ATATCTTGCA AATTAGATTA GGGGAATTCC GCTTGGTCAA  TAGATTTCTG GCTCTTGATC TTGCCTACGC ATGATTTGAT GTTGTGATTT CTTTTAGTTC TTGTTGAAGT TGTTCATGTT GCAATTGGGG ACATTGTGTT TGTATGCAAC TGGAAAATGA  TCTTATGTTG TGAATTCCTT TAGCTCACTT TTTGAAGTTT CTCGTGTTAA AAAAGTGGAT TTTTGTTTGT GCTCAGGGAT GTGATGCATC AGTCCTTCTG GACTCGGATG GATCTATGAT  ATCTGAGAAA GAGGCACCTC CGAACCTCTC TTTGAAAGGG TTAGATGTGA TTGACGATAT TAAGTCTGAG CTCGAGCATT TCTGTCCTGG AGTTGTTTCC TGCGCGGACA TTATTGTCTT  GGCTGCTAGA GAGTCTGTTA AAGTGGTGAA TACCCATCTC TCTTACTCTC TTCTGGTTTG TCCATGTTAA TATTTCTAAT CTCTTGCCTT GTGAACCTTT CAGGCAGGTG GTCCACGATA  TGTTGTTGAA ACTGGAAGGA AAGATAGTTT AGGGGCCTTC AAGGAAGCTG CAGAACGATG GCTTCCTTCA CCAAATGCTA ATCTCTCGGA TATTCTTCAT GTATTTGCCT CCAAGGGATT  TAACGAGCAA GAAACCGTCA GTCTACTTGG TATTCCCTCT CGTGTTATCT CAAACATGTC TCTCTTTTGT CCTGATTTGT ATATTCTGAC TGTACTAATT CAGGAGCACA CAGCATTGGC  ATTACGCACT GCATATTTTT CGAGAACCGG CTCTACAACT TCTCAGGAAC AGGCAAACCT GACCCTGAAC TCAATCCAGA GTTCCTTGAA GAACTAAAAG CCGTATGCCC CTTCTCTGCG  CCGTCTTCAT CTCCATCTCC ACATATGTGC TCTGGGTCAG CACCTTCCTT GCCTGCATCA GGGAACTCGA AGAACAAAAC TGATGGAGTG ATTGATTTGA GCTTTAACAA TGAAGGAGGT  GATGCTCATT TCGGGACAAG ATACTATAGA AGACTAAGGC TTGGGAAAGG GGTGATGTTT GCTGATCAGC AACTTACCAC CAATACTAAG ACAGAGTTAT GGGTGAGACG TTATTCTGAG  AATCCAGCTT TATTCCGTGC AGATTTCGAG GATGCAATGA TTAAACTCTC CAATCATGGA GTCTTGACTG GTCATCTAGG TCAAGTGAGA AAAAGTTGTT CAAAAGTCCT CCCACCAGAT 
GAAGATTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAATCCA CCGTTGAAGA AGATGTGAGC TCTTTCTACG TGTCTATCGC AGAAGAGGAT GACGATCGAT CTTACTCGCT CAGCTCGGAT TACTACCGCC AGTCTTGCCC TTCGGTAGAG  AGAATCGTTA GGAAAATGAT CAGAGATGTC CACCATAGTA GACCTAGCAT AGCTCCGTCT CTCATCCGCC TCCTATTTCA TGATTGCTTC GTCGAGGGAT GTGATGCATC AGTCCTTCTG  GACTCGGATG GATCTATGAT ATCTGAGAAA GAGGCACCTC CGAACCTCTC TTTGAAAGGG TTAGATGTGA TTGACGATAT TAAGTCTGAG CTCGAGCATT TCTGTCCTGG AGTTGTTTCC  TGCGCGGACA TTATTGTCTT GGCTGCTAGA GAGTCTGTTA AAGTGGCAGG TGGTCCACGA TATGTTGTTG AAACTGGAAG GAAAGATAGT TTAGGGGCCT TCAAGGAAGC TGCAGAACGA  TGGCTTCCTT CACCAAATGC TAATCTCTCG GATATTCTTC ATGTATTTGC CTCCAAGGGA TTTAACGAGC AAGAAACCGT CAGTCTACTT GGAGCACACA GCATTGGCAT TACGCACTGC  ATATTTTTCG AGAACCGGCT CTACAACTTC TCAGGAACAG GCAAACCTGA CCCTGAACTC AATCCAGAGT TCCTTGAAGA ACTAAAAGCC GTATGCCCCT TCTCTGCGCC GTCTTCATCT  CCATCTCCAC ATATGTGCTC TGGGTCAGCA CCTTCCTTGC CTGCATCAGG GAACTCGAAG AACAAAACTG ATGGAGTGAT TGATTTGAGC TTTAACAATG AAGGAGGTGA TGCTCATTTC  GGGACAAGAT ACTATAGAAG ACTAAGGCTT GGGAAAGGGG TGATGTTTGC TGATCAGCAA CTTACCACCA ATACTAAGAC AGAGTTATGG GTGAGACGTT ATTCTGAGAA TCCAGCTTTA 
TTCCGTGCAG ATTTCGAGGA TGCAATGATT AAACTCTCCA ATCATGGAGT CTTGACTGGT CATCTAGGTC AAGTGAGAAA AAGTTGTTCA AAAGTCCTCC CACCAGATGA AGATTGA 

Retrieve as FASTA