View Redoxidase 9841

Entry information : TviGPx01

Entry ID	9841
Creation	2011-11-23 (Passaia GisÃ¨le)
Last sequence changes	2011-11-28 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2013-09-06 (Catherine Mathe (Scipio))

Peroxidase information: TviGPx01

Name

TviGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Sordariomycetes Hypocreaceae Hypocrea

Organism

Trichoderma virens [TaxId: 29875 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

Oxidative stress

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	TviGPx01 start..stop	S start..stop
TaspGPx01	395	3.87e-141	5..255	5..263
TatGPx01	372	7.34e-132	5..255	5..262
TharGPx01	350	1.54e-124	86..255	1..170
HjGPx01	336	8.1e-118	30..255	21..263

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	632214..632511	296	N° 2	631591..632057	465
complement(join(631591..632057,632214..632511))

Literature and cross-references TviGPx01

DNA ref.	JGI genome: scaffold_2 (632511..631591)
EST ref.	GenBank: FG380082.1 [3' end]

Protein sequence: TviGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	255
PWM (Da):	28561.46
PI (pH):	9.36

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAHFANSKFTSRVLGRALLGPNPRSCDTGRFEAIRRAPLVAKRHQWTDLRSRSLYSGAVRPGASTCTLHQHRIQSTASCDRLYSTMSSATNFFDFTVLDAADTEVPLSNYKGKVVLVVNT
ASKCGFTYQYKNLESVYQAIKKEYPDDFTVIGFPCNQFGGQEPGSNEEIQNFCSLDQKTTFPVMAKINVNGNDAHPLYQWLKHEKPGLLGLERIKWNFEKFLIGRDGKVIDRWASTTEPE
KFQSKIIEAIKAPA

Retrieve as FASTA

Remarks

Complete sequence from genomic (1 intron) and 4 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCATTTTGCAAATTCCAAATTCACATCCCGCGTGCTGGGCCGGGCGCTGCTGGGCCCGAACCCTCGGAGCTGTGACACAGGCCGTTTTGAAGCAATCCGCCGAGCGCCGCTAGTA
GCAAAACGTCACCAGTGGACTGACTTGAGGAGTCGCTCTTTATATTCTGGCGCGGTCCGTCCTGGAGCCTCGACTTGCACTCTGCATCAACACCGCATCCAGTCCACAGCTTCTTGCGAC
AGACTCTATTCCACAATGTCTTCTGCCACCAACTTCTTCGACTTCACGGTGCTCGACGGTAAGCTCGACATTCCCTCCAACCCCCCCCGAGCCCCTCCATCCCCGTCGCCCAGCTTTGCG
CCGATAGCTATCACCCCGCTATTGCGCCAGACACAACGCCCATGATAGTAGCAGCCCGGAGACTTTTCCCGCTAACGAGCACGCTTTCTTACAGCCCCGCCGACACCGAAGTCCCTCTGT
CCAACTACAAGGGCAAGGTCGTCTTGGTTGTCAACACGGCTTCCAAGTGCGGCTTCACCTACCAGTACAAGAACCTCGAGTCCGTCTACCAGGCCATCAAGAAGGAGTACCCTGATGACT
TCACCGTCATCGGCTTCCCCTGCAACCAGTTTGGCGGCCAAGAGCCCGGCAGCAACGAGGAGATCCAGAACTTCTGCTCGCTGGACCAGAAGACTACCTTCCCCGTCATGGCCAAGATTA
ACGTCAACGGCAACGATGCGCACCCCCTGTACCAGTGGCTGAAGCACGAGAAGCCCGGCCTTCTTGGTCTAGAGAGAATCAAGTGGAACTTTGAGAAGTTCCTGATCGGCCGTGACGGCA
AGGTTATCGACCGCTGGGCCAGCACCACCGAGCCGGAGAAGTTTCAGAGCAAGATCATCGAGGCCATCAAGGCGCCAGCCCCA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCATTTTGCAAATTCCAAATTCACATCCCGCGTGCTGGGCCGGGCGCTGCTGGGCCCGAACCCTCGGAGCTGTGACACAGGCCGTTTTGAAGCAATCCGCCGAGCGCCGCTAGTA
GCAAAACGTCACCAGTGGACTGACTTGAGGAGTCGCTCTTTATATTCTGGCGCGGTCCGTCCTGGAGCCTCGACTTGCACTCTGCATCAACACCGCATCCAGTCCACAGCTTCTTGCGAC
AGACTCTATTCCACAATGTCTTCTGCCACCAACTTCTTCGACTTCACGGTGCTCGACGCCGCCGACACCGAAGTCCCTCTGTCCAACTACAAGGGCAAGGTCGTCTTGGTTGTCAACACG
GCTTCCAAGTGCGGCTTCACCTACCAGTACAAGAACCTCGAGTCCGTCTACCAGGCCATCAAGAAGGAGTACCCTGATGACTTCACCGTCATCGGCTTCCCCTGCAACCAGTTTGGCGGC
CAAGAGCCCGGCAGCAACGAGGAGATCCAGAACTTCTGCTCGCTGGACCAGAAGACTACCTTCCCCGTCATGGCCAAGATTAACGTCAACGGCAACGATGCGCACCCCCTGTACCAGTGG
CTGAAGCACGAGAAGCCCGGCCTTCTTGGTCTAGAGAGAATCAAGTGGAACTTTGAGAAGTTCCTGATCGGCCGTGACGGCAAGGTTATCGACCGCTGGGCCAGCACCACCGAGCCGGAG
AAGTTTCAGAGCAAGATCATCGAGGCCATCAAGGCGCCAGCCCCA

Retrieve as FASTA