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Entry information : PoCIIBA02_PC15 (MnP-short)
Entry ID 9843
Creation 2011-11-25 (Christophe Dunand)
Last sequence changes 2011-11-25 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2012-08-22 (Nizar Fawal)
Peroxidase information: PoCIIBA02_PC15 (MnP-short)
Name (synonym) PoCIIBA02_PC15 (MnP-short)
Class Other class II peroxidase type A    [Orthogroup: CIIBA001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Pleurotaceae Pleurotus
Organism Pleurotus ostreatus (Oyster mushroom)    [TaxId: 5322 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PoCIIBA02_PC15
start..stop		 S start..stop
PoCIIBA02_C9 729 0 1..360 1..360
PoCIIBA01_C9 560 0 1..361 1..359
PoCIIBA01_PC15 559 0 1..360 1..358
ParcCIIBA04 531 0 20..361 21..362
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2770353..2770466 112 N° 2 2770235..2770298 62 N° 3 2770160..2770176 15 N° 4 2770086..2770094 7
N° 5 2769977..2770035 57 N° 6 2769869..2769924 54 N° 7 2769738..2769816 77 N° 8 2769444..2769684 239
N° 9 2769331..2769384 52 N° 10 2769129..2769273 143 N° 11 2768903..2769078 174 N° 12 2768778..2768846 67
complement(join(2768778..2768846,2768903..2769078,2769129..2769273,2769331..2769 384,2769444..2769684,2769738..2769816,2769869..2769924,2769977..2770035,2770086. .2770094,2770160..2770176,2770235..2770298,2770353..2770466))


exon

Literature and cross-references PoCIIBA02_PC15 (MnP-short)
DNA ref. JGI genome:   scaffold_05 (2770466..2768778)
Protein sequence: PoCIIBA02_PC15 (MnP-short)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360 (342)
PWM (Da):   %s   38067.1 (36114.0)  
PI (pH):   %s   4.74 (4.67) Peptide Signal:   %s   cut: 19 range:19-360
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFKALFTFATLAVAALAAPSHTKRATCSGGRTTAHASCCIWFDVLDDIQENLFDGGECGEEVHESLRLTFHDAIGFSPKLFLQGKFGGLGADGSIMAHSEIETAFPANLGVDEIIEAQR
PFAIKHKVSFGDFIQFAGAVGVSNCAGGARIPFHAGRLNVSLPSPDLLVPEPSDSVDTILARMGDAGFSPNEVVDLLISHTVAAQDNVDPTIPGTPFDSTPNSFDAQFFVETLLKGSITP
GNGTNRGQSLSPIPGEFRLTSDFLLARDARTACEWQSFITDHASMVSKFEKVMDKMSTLGQIRALLTDCSDVIPVPKVALTKTPTLPAGRSLADIEAACRATPFPALTADPGPVTTVPPV
*

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTTCAAGGCTCTATTCACTTTCGCCACTCTCGCTGTAGCGGCCCTCGCTGCTCCTAGCCACACCAAGCGCGCCACATGCTCGGGCGGCAGGACCACTGCTCATGCATCCGTAGGT
GCTTTGCCCATCATGCTATGACTTCGTTGCTAACAGTGTCCGCGTCAGTGTGCTGCATCTGGTTCGACGTTTTGGACGACATTCAAGAGAACCTCTTTGATGGTGGCGAGTGCGGTAAGT
AGCTTGCGATCACCATGCGCATGGCCTGTTCTCAAGTTTACATTGACTGCAGGTGTGAGGAAGTCCACGAGGTAATAACAATGGATCCTATGCATGGTGAACAATACTGATCTGAGACCA
ACGCAACGTTCTGCAGTCTCTCTCCGTGTAAGGATTATTGACTCGCTCCATCCCACATCGCTGACCCACTATATTAGTTTTGACCTTCCACGACGCTATTGGATTCTCCCCTAAGCTCTT
CCTCCAAGGCAAATTTGGGTAAGTGACGCAAGGTTCCTGCCTCTTCGAAGAGTCTCTGAACTTCAAACAGTGTGGTCTCGGCGCTGATGGTTCCATCATGGCCCACTCTGAGATCGAAAC
CGCCTTCCGTAAGTGTTCTACTCATCAGAACAAGAATACACAATCTCAATTCCCTCAAAGCCCCGCCAATCTTGGTGTCGATGAGATCATTGAAGCTCAAAGGCCGTTTGCCATCAAGCA
CAAAGTATCTTTCGGTGACTTGTACGTGCATCTTGTGATCGTGCGGAGCTGGTGTTTATACGCATTGCCATCAGCACATCCAATTCGCTGGTGCCGTCGGTGTTAGCAACTGCGCTGGTG
GTGCTCGCATTCCTTTCCACGCCGGACGTCTCAACGTCTCTTTGCCCTCGCCAGACCTCCTCGTCCCCGAACCTAGCGACTCTGTTGACACCATCTTGGCCCGCATGGGCGATGCTGGCT
TCTCCCCTAACGAAGTAGTTGATTTGCTCATCTCTCACACCGTCGCTGCTCAGGACAACGTTGACCCCACTATTCCCGTAAGCAATCATTGCAAATTCTTACCAGTTCCTATTGCATCCT
AACAATCGGCGTACAGGGGGAACTCCCTTCGACTCTACTCCCAACAGCTTCGACGCTCAGTTCTTCGTCGAGGTTCGCAAAAATCTACTAGTACCTAGTCCGCAAAAGTACTAATCGGGG
GATCTGTAGACACTCTCCTCAAGGGAAGCATCACCCCCGGAAACGGAACTAACCGAGGCCAATCCCTCTCTCCCATCCCGGGCGAGTTCCGCCTTACTTCTGACTTCCTTCTTGCCCGCG
ATGCCCGCACTGCTTGCGAATGGCAATCCTTCATCAGTGAGTCAGAGTTCCCTCCACCTTCGCCTATATATTGACCCACTTGCCAGCCCCGACCACGCCTCCATGGTCTCGAAATTCGAG
AAGGTCATGGACAAGATGTCCACTCTAGGCCAAATCCGAGCTCTCCTCACTGACTGCTCCGACGTTATTCCTGTGCCCAAGGTCGCCCTCACCAAGACCCCTACCCTCCCAGCTGGGCGC
AGCTTGGCTGATATTGAGGCCGCAGTAAGTTGTTTTGCCTTGTGGGCGTTTTCTCTCTATCTGACCATCGTGTACAATAGTGTGCCGCGCCACGCCATTCCCAGCCCTCACTGCTGACCC
TGGCCCAGTTACCACCGTTCCTCCTGTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTTCAAGGCTCTATTCACTTTCGCCACTCTCGCTGTAGCGGCCCTCGCTGCTCCTAGCCACACCAAGCGCGCCACATGCTCGGGCGGCAGGACCACTGCTCATGCATCCTGCTGC
ATCTGGTTCGACGTTTTGGACGACATTCAAGAGAACCTCTTTGATGGTGGCGAGTGCGGTGAGGAAGTCCACGAGTCTCTCCGTTTGACCTTCCACGACGCTATTGGATTCTCCCCTAAG
CTCTTCCTCCAAGGCAAATTTGGTGGTCTCGGCGCTGATGGTTCCATCATGGCCCACTCTGAGATCGAAACCGCCTTCCCCGCCAATCTTGGTGTCGATGAGATCATTGAAGCTCAAAGG
CCGTTTGCCATCAAGCACAAAGTATCTTTCGGTGACTTCATCCAATTCGCTGGTGCCGTCGGTGTTAGCAACTGCGCTGGTGGTGCTCGCATTCCTTTCCACGCCGGACGTCTCAACGTC
TCTTTGCCCTCGCCAGACCTCCTCGTCCCCGAACCTAGCGACTCTGTTGACACCATCTTGGCCCGCATGGGCGATGCTGGCTTCTCCCCTAACGAAGTAGTTGATTTGCTCATCTCTCAC
ACCGTCGCTGCTCAGGACAACGTTGACCCCACTATTCCCGGAACTCCCTTCGACTCTACTCCCAACAGCTTCGACGCTCAGTTCTTCGTCGAGACTCTCCTCAAGGGAAGCATCACCCCC
GGAAACGGAACTAACCGAGGCCAATCCCTCTCTCCCATCCCGGGCGAGTTCCGCCTTACTTCTGACTTCCTTCTTGCCCGCGATGCCCGCACTGCTTGCGAATGGCAATCCTTCATCACC
GACCACGCCTCCATGGTCTCGAAATTCGAGAAGGTCATGGACAAGATGTCCACTCTAGGCCAAATCCGAGCTCTCCTCACTGACTGCTCCGACGTTATTCCTGTGCCCAAGGTCGCCCTC
ACCAAGACCCCTACCCTCCCAGCTGGGCGCAGCTTGGCTGATATTGAGGCCGCATGCCGCGCCACGCCATTCCCAGCCCTCACTGCTGACCCTGGCCCAGTTACCACCGTTCCTCCTGTG
TAA

Retrieve as FASTA