Entry information : GmPrx[P]319
Entry ID 9855
Creation 2011-11-29 (Qiang Li)
Last sequence changes 2011-12-02 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang Li)
Peroxidase information: GmPrx[P]319
Name GmPrx[P]319
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]319
start..stop
S start..stop
GmPrx105 170 3e-54 1..88 245..332
GmPrx[P]82 157 7e-52 1..88 54..141
GmPrx[P]219 161 7e-52 1..87 159..245
GmPrx[P]43 158 5e-51 1..87 142..228
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 26542275..26542541 267  
complement(join(26542275..26542541))


exon

Literature and cross-references GmPrx[P]319
DNA ref. Phytozome 12:   Gm18 (26542541..26542275)
Protein sequence: GmPrx[P]319
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   88
PWM (Da):   %s   9993.15  
PI (pH):   %s   9.2
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

APFDFETPKR FDNHYFINIL EGKGLLGSDN VLINHDLHGK ITEQVWAYAS NVKLLFASFA KSMIKMGNIN VLTRNEGEIR RNCRFVNA 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (Only 3' end).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCACCATTTG ATTTTGAAAC CCCAAAAAGA TTTGACAATC ACTACTTCAT AAACATTCTT GAAGGGAAAG GCTTGTTAGG TTCTGACAAT GTTCTTATCA ACCATGACTT ACATGGAAAG  ATTACAGAGC AAGTGTGGGC TTATGCCTCT AATGTAAAAC TTTTGTTTGC TTCATTTGCT AAATCTATGA TTAAGATGGG AAACATCAAT GTTCTTACAA GAAATGAGGG GGAAATTAGG 
AGGAATTGTA GGTTTGTCAA TGCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCACCATTTG ATTTTGAAAC CCCAAAAAGA TTTGACAATC ACTACTTCAT AAACATTCTT GAAGGGAAAG GCTTGTTAGG TTCTGACAAT GTTCTTATCA ACCATGACTT ACATGGAAAG  ATTACAGAGC AAGTGTGGGC TTATGCCTCT AATGTAAAAC TTTTGTTTGC TTCATTTGCT AAATCTATGA TTAAGATGGG AAACATCAAT GTTCTTACAA GAAATGAGGG GGAAATTAGG 
AGGAATTGTA GGTTTGTCAA TGCTTAG 

Retrieve as FASTA