Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
503 (481) |
| PWM (Da): |
53980.03 (51602.7) |
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| PI (pH): |
4.42 (4.37) |
Peptide Signal: |
cut: 23 range:23-503 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MFLTVHPFLSLLLVSFGLGSFAIPSHENVMRQGRTAPLLTVFPGQAALPTLTDIINLNATNGTYLPIQNIQGDTLVGMKKAQEIFYFFHINDAPAFKSTMQSYISNITSVATLLSDPSAQPLAFVNVALSYSGLTTLGVPDDIGDSQFSAGQFADAVNLG
DDISQWETAFKGTNIHGVFLIGSDSAYTTQYANDITSIFGSSITQVYQIDAAARPGSEAGHEHFGYLDGISNPAVTGFATTALPGQTIVAPGTILCNRLGDLALRPLWALDGTFMAFRKL
QQKVPEFDHWTLDNAVQDPSLNLTQQEGAQLLGARMFGRWPSGAPIDITPHADDPELGADPERNNNFDFSHLGSSLASDQSRCPFSAHIRKTNPRADLLDLDTINHAIRAGIPYGPEVTS
AESNSSTTTEDRGLAFVEYQSDIANGFRFQQITWANTANFPPLKTVIPGIEPIIGQGGGKIASGLNPNDQIETYAVPDFVVPKGGEYFFVPSISTLSEVFVA |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (6 introns). Uncorrect prediction from JGI (PS is too short) |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCCTCACAGTCCATCCGTTCCTCTCGCTGTTGCTCGTGAGTTTTGGACTAGGCAGTTTTGCCATTCCAAGCCATGAGAATGTTATGCGACAGGGTAGAACTGCGCCTCTGTTGACA
GGTACTTGAGTTCTGCGCACGCGATAGCCTTGATAGCTGACACATCTTGCCAGTTTTTTCCCGGGACAGGCTGCGCTGCCGACCCTTACAGACATAATCAACCTGAATGCCACGAACGGG
ACCTACCTCCCCATCCAGAACATACAAGGAGATACTCTGTACGTCGCTAACTCTCACACCGCACAACATATTCTCATGTGGGGTATAGAGAGTTGGTATGAAGAAAGCGCAGGAAATCTT
CTACTTTTTCCATATCAACGATGCTCCCGCTTTCAAGTCTACGATGCAGTCTTATATCTCCAACATCACCTCCGTTGCCACTTTGCTTTCTGACCCGTCAGCCCAGCCCCTCGCGTTTGT
CAATGTCGCATTGTCGTATAGCGGTCTTACAACTTTAGGTGTTCCCGACGACATTGGGGACTCGCAATTCTCTGCGGGTCAATTCGCAGACGCCGTGAATCTCGGGGACGATATTTCTCA
GTGGGAGACAGCGTTCAAAGGCACAAATATCCATGGCGTGTTTCTGATCGGTAGCGATCAGGTTAGTGCCATGAGATCCACACGGACGTGCCACTGATCATATCCATGTCGCAGAGAGCG
CGTACACGACGCAATATGCCAACGACATCACCTCAATCTTCGGCAGCTCTATCACACAGGTGTACCAGATCGACGCGGCTGCGCGTCCAGGATCGGAAGCTGGTCACGAACGTGAGTATT
TGTCTTCACGGTACTAGTCAACTCTGATGAATATACCTTTGGATGCACAGATATTTTGGGTACCTAGATGGCATCTCCAATCCAGCTGTCACGGGATTTGCTACGACAGCTCTTCCAGGA
CAGACCATTGTAGCTCCAGGTACCATTCTTTGCAACCGTCTCGGAGATCTAGCGCTACGCCCTTTGTGGGCCCTAGACGGCACGTTCATGGCATTCCGCAAGCTGCAGCAAAAGGTTCCA
GAGTTCGATCACTGGACTTTGGACAATGCTGTGCAAGATCCCAGCCTGAATCTAACACAGCAAGAGGGCGCACAGCTTCTGGGAGCACGTATGTTTGGCCGCTGGCCGAGTGGAGCACCG
ATAGATATCACACCCCATGCCGATGACCCGGAACTAGGTGCAGACCCCGAGCGCAACAACAACTTCGATTTTTCGCACTTGGGCTCGAGCCTCGCTAGCGATCAGAGCCGCTGCCCTTTC
AGCGCACATATACGTAAAACCAATCCTCGCGCAGATCTCTTAGACTTGGACACTATTAACCATGCCATTCGTGCCGGTATTCCCTACGGTCCCGAAGTGACGTCCGCGGAAAGTAATTCC
TCTACTACCACTGAGGATCGTGGCCTCGCATTCGGTAAGTTTGCATTGCTCATAGACCGGTTTTCAGGTCCTAAGATATTTACAGTTTTGAATACCAATCCGACATTGCCAATGGATTCC
GCTTCCAGCAAATTACGTGGGCGAACACTGCAAAGTACGTGCTTTTTTTTTTTTAGAGTATTCTGTATTTACTTATGAACGGTCTCAACCCAGCTCTTTCCGCCTCTCAAGACGGTAATT
CCTGGAATTGAGCCAATCATCGGACAAGGCGGAGGTAAGATAGCGTCAGGATTGAATCCAAATGACCAGATCGAAACATATGCTGTGCCCGACTTTGTCGTTCCCAAAGGCGGCGAATAC
TTCTTCGTGCCGTCGATCTCCACTTTATCCGAAGTCTTCGTTGCTTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCCTCACAGTCCATCCGTTCCTCTCGCTGTTGCTCGTGAGTTTTGGACTAGGCAGTTTTGCCATTCCAAGCCATGAGAATGTTATGCGACAGGGTAGAACTGCGCCTCTGTTGACA
GTTTTCCCGGGACAGGCTGCGCTGCCGACCCTTACAGACATAATCAACCTGAATGCCACGAACGGGACCTACCTCCCCATCCAGAACATACAAGGAGATACTCTAGTTGGTATGAAGAAA
GCGCAGGAAATCTTCTACTTTTTCCATATCAACGATGCTCCCGCTTTCAAGTCTACGATGCAGTCTTATATCTCCAACATCACCTCCGTTGCCACTTTGCTTTCTGACCCGTCAGCCCAG
CCCCTCGCGTTTGTCAATGTCGCATTGTCGTATAGCGGTCTTACAACTTTAGGTGTTCCCGACGACATTGGGGACTCGCAATTCTCTGCGGGTCAATTCGCAGACGCCGTGAATCTCGGG
GACGATATTTCTCAGTGGGAGACAGCGTTCAAAGGCACAAATATCCATGGCGTGTTTCTGATCGGTAGCGATCAGAGCGCGTACACGACGCAATATGCCAACGACATCACCTCAATCTTC
GGCAGCTCTATCACACAGGTGTACCAGATCGACGCGGCTGCGCGTCCAGGATCGGAAGCTGGTCACGAACATTTTGGGTACCTAGATGGCATCTCCAATCCAGCTGTCACGGGATTTGCT
ACGACAGCTCTTCCAGGACAGACCATTGTAGCTCCAGGTACCATTCTTTGCAACCGTCTCGGAGATCTAGCGCTACGCCCTTTGTGGGCCCTAGACGGCACGTTCATGGCATTCCGCAAG
CTGCAGCAAAAGGTTCCAGAGTTCGATCACTGGACTTTGGACAATGCTGTGCAAGATCCCAGCCTGAATCTAACACAGCAAGAGGGCGCACAGCTTCTGGGAGCACGTATGTTTGGCCGC
TGGCCGAGTGGAGCACCGATAGATATCACACCCCATGCCGATGACCCGGAACTAGGTGCAGACCCCGAGCGCAACAACAACTTCGATTTTTCGCACTTGGGCTCGAGCCTCGCTAGCGAT
CAGAGCCGCTGCCCTTTCAGCGCACATATACGTAAAACCAATCCTCGCGCAGATCTCTTAGACTTGGACACTATTAACCATGCCATTCGTGCCGGTATTCCCTACGGTCCCGAAGTGACG
TCCGCGGAAAGTAATTCCTCTACTACCACTGAGGATCGTGGCCTCGCATTCGTTGAATACCAATCCGACATTGCCAATGGATTCCGCTTCCAGCAAATTACGTGGGCGAACACTGCAAAC
TTTCCGCCTCTCAAGACGGTAATTCCTGGAATTGAGCCAATCATCGGACAAGGCGGAGGTAAGATAGCGTCAGGATTGAATCCAAATGACCAGATCGAAACATATGCTGTGCCCGACTTT
GTCGTTCCCAAAGGCGGCGAATACTTCTTCGTGCCGTCGATCTCCACTTTATCCGAAGTCTTCGTTGCTTAA |
Retrieve as FASTA
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